Flavobacterium defluvii sp. nov., isolated from activated sludge
| Autor: | Che Ok Jeon, Pil-Yong Yun, Minjeong Park, Hyeon-Su Ro, Seung Hyun Ryu, Thu-Huong Thi Vu |
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| Rok vydání: | 2007 |
| Předmět: |
DNA
Bacterial Sequence analysis Gliding motility Movement Molecular Sequence Data Biology DNA Ribosomal Flavobacterium Microbiology Phylogenetics RNA Ribosomal 16S Phylogeny Ecology Evolution Behavior and Systematics Base Composition Korea Sewage Phosphatidylethanolamines Fatty Acids Temperature Nucleic Acid Hybridization Genes rRNA Sequence Analysis DNA General Medicine Hydrogen-Ion Concentration Ribosomal RNA 16S ribosomal RNA biology.organism_classification Flavobacteriaceae Bacterial Typing Techniques RNA Bacterial Water Microbiology Bacteria |
| Zdroj: | International Journal of Systematic and Evolutionary Microbiology. 57:233-237 |
| ISSN: | 1466-5034 1466-5026 |
| DOI: | 10.1099/ijs.0.64669-0 |
| Popis: | A Gram-negative bacterium, designated strain EMB117T, was isolated from a municipal wastewater treatment plant and characterized by polyphasic taxonomy. The cells were non-spore-forming rods that showed gliding motility. Optimal growth occurred at 25–30 °C and pH 7.0–8.0. Strain EMB117T contained phosphatidylethanolamine as the predominant polar lipid, and the major fatty acids were iso-C15 : 0, iso-C17 : 0 3-OH, iso-C15 : 0 3-OH and summed feature 3 (C16 : 1 ω7c and/or iso-C15 : 0 2-OH). The G+C content of the genomic DNA was 33.5 mol% and the major isoprenoid quinone was MK-6. A phylogenetic analysis based on 16S rRNA gene sequences showed that strain EMB117T belonged to the genus Flavobacterium and was most closely related to Flavobacterium johnsoniae DSM 425T (97.8 % sequence similarity). The DNA–DNA relatedness between strain EMB117T and F. johnsoniae ATCC 17061T was about 18 %. On the basis of the phenotypic, chemotaxonomic and molecular data, strain EMB117T represents a novel species within the genus Flavobacterium, for which the name Flavobacterium defluvii sp. nov. is proposed. The type strain is EMB117T (=KCTC 12612T=DSM 17963T). |
| Databáze: | OpenAIRE |
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