Rhizospheric soil and root endogenous fungal diversity and composition in response to continuous Panax notoginseng cropping practices
| Autor: | Anxiu Kuang, Xiaoran Li, Haoyu Li, Xiuling Ji, Yunlin Wei, Yong Tan, Yinshan Cui |
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| Rok vydání: | 2016 |
| Předmět: |
0301 basic medicine
Fusarium Crops Agricultural China 030106 microbiology Panax notoginseng Microbiology Plant Roots Plant use of endophytic fungi in defense 03 medical and health sciences Soil Soil pH Botany Endophytes DNA Fungal Fertilizers Phylogeny Soil Microbiology Plant Diseases Cylindrocarpon Rhizosphere biology fungi Fungi food and beverages Agriculture Biodiversity biology.organism_classification 030104 developmental biology Microbial population biology Soil fertility |
| Zdroj: | Microbiological research. 194 |
| ISSN: | 1618-0623 |
| Popis: | Rhizosphere and endophytic fungal communities are considered critically important for plant health and soil fertility. In response to continuous cropping, Panax notoginseng becomes vulnerable to attack by fungal pathogens. In the present study, culture-independent Illumina MiSeq was used to investigate the rhizospheric and root endophytic fungi in response to continuous Panax notoginseng cropping practices. The results demonstrated that fungal diversity is increased inside the roots and in rhizospheric. Ascomycota, Zygomycota, Basidiomycota and Chytridiomycota were the dominant phyla detected during the continuous cropping of Panax notoginseng. The fungal diversity in the rhizospheric soil and roots of root-rot P. notoginseng plants are less than that of healthy plants in the same cultivating year, thus showing that root-rot disease also affects the community structure and diversity of rhizospheric and root endophytic fungi. Similarities in the major fungal components show that endophytic fungal communities are similar to rhizospheric soil fungal community based on a specialized subset of organisms. Canonical correspondence analysis on the fungal communities in root-rot rhizospheric from both healthy plants and rotation soils reveals that the soil pH and organic matter have the greatest impact upon the microbial community composition during continuous cropping, whereas soil nutrition status does not significantly affect the fungal community composition in response to continuous cropping practices. In addition, the results suggest that the unclassified genera Leotiomycetes, Cylindrocarpon, Fusarium and Mycocentrospora are shown as the potential pathogens which are responsible for the obstacles in continuous cropping of P. notoginseng. Further exploration of these potential pathogens might be useful for the biological control of continuous cropping of P. notoginseng. |
| Databáze: | OpenAIRE |
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