Clinical Usefulness of
Autor: | Sebastiano Leone, Alessandra Bandera, Anna Maria Peri, Marianna Rossi, Andrea Gori, Monica Manenti, Simone Bramati, Guglielmo Migliorino, Luca Bisi, Monica Raggi, Laura Alagna, Liliane Chatenoud, Egidio Franco Viganò, Annalisa Cavallero |
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Rok vydání: | 2019 |
Předmět: |
Microbiology (medical)
clone (Java method) lcsh:Immunologic diseases. Allergy genotyping profiles carbapenemases Klebsiella pneumoniae Immunology drug-resistant Drug resistance Biology law.invention Enterobacteriaceae law Genotype lcsh:Pathology Immunology and Allergy Molecular Biology Genotyping Polymerase chain reaction KPC-Kp Hazard ratio Outbreak biology.organism_classification Virology Infectious Diseases lcsh:RC581-607 Research Article lcsh:RB1-214 |
Zdroj: | Pathogens and Immunity, Vol 1, Iss 2, Pp 352-370 (2017) Pathogens & Immunity |
ISSN: | 2469-2964 |
Popis: | Background: During the last decade, the spread of Klebsiella pneumoniae-carbapenemase-producing Klebsiella pneumoniae (KPC-Kp) has increased dramatically worldwide. In this scenario, growing interest has been addressed to genotyping of KPC-Kp strains, which emerged as an important tool for a better understanding of the epidemiological and clinical characteristics of the outbreaks. Methods: We performed a retrospective cohort study on patients infected with KPC-Kp during a 28-month outbreak period (January 2010–April 2012) at San Gerardo Hospital (Monza, Italy), investigating KPC-Kp genotypes by means of repetitive element sequence-based polymerase chain reaction (Rep-PCR). Results: We enrolled 97 patients infected with KPC-Kp. Rep-PCR analysis identified 5 distinct clone types, with different distribution over time. During the first 12 months of the outbreak period, only 1 clone was detected (clone A, in 47 patients), while the 4 other clones were identified over the remaining 16 months (clones C, E, and F/L in 23, 24, and 3 patients respectively). Mechanical ventilation was less frequent in patients infected with clones C/E/F/L (OR = 0.14; 95% CI: 0.05-0.37) compared to clone A, and the Charlson comorbidity index (CI) was more likely to have a score >5 in patients infected with clones C/E/F/L (OR = 7.21; 95% CI: 2.24-23.14) compared to clone A. Overall mortality was higher in patients infected with clones C/E/F/L (13/20 patients, 65%) compared to those infected with clone A (7/20, 35%). Mortality in patients infected with clones C/E/F/L remained significantly higher even after adjusting for the potential confounding effect of comorbidities (ie, CI), with a hazard ratio (HR) of 4.65 (95% CI: 1.83-11.89). Conclusions: Our results suggested a close relationship between strain genotype and clinical outcome. |
Databáze: | OpenAIRE |
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