| Autor: |
Fonknechten, Nuria, Chaussonnerie, Sébastien, Tricot, Sabine, Lajus, Aurélie, Andreesen, Jan R, Perchat, Nadia, Pelletier, Eric, Gouyvenoux, Michel, Barbe, Valérie, Salanoubat, Marcel, Paslier, Denis Le, Weissenbach, Jean, Cohen, Georges N, Kreimeyer, Annett |
| Rok vydání: |
2021 |
| DOI: |
10.6084/m9.figshare.14437238.v1 |
| Popis: |
Additional file 4: Comparative analysis of amino acid degradation pathways in several clostridial species. Blast searches (criteria: 30% identity over at least 80% of the length of the reference protein) were performed to determine the presence of the key enzymes in the microorganisms. All protein sequences were taken from C. sticklandii with two exceptions: the sequence of methylaspartate mutase was from Clostridium cochlearium, and that of 2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus fermentans. C.stick: Clostridium sticklandii DSM 519; C.acet: Clostridium acetobutylicum ATCC 824; C.beij: Clostridium beijerinckii NCIMB 8052; C.botu: Clostridium botulinum A Hall; C.diff: Clostridium difficile 630; C.kluv: Clostridium kluyveri DSM 555; C.novy: Clostridium novyi NT; C.perf: Clostridium perfringens ATCC 13124; C.phyt: Clostridium phytofermentans ISDg; C.teta: Clostridium tetani E88; C.ther: C. thermocellum ATCC 27405; C.spor: C. sporogenes ATCC 15579; A.meta: Alkaliphilus metalliredigens QYMF; A.orem: Alkaliphilus oremlandii OhILAs; M.ther: Moorella thermoacetica ATCC 39073; C.coch: Clostridium cochlearium; A.ferm: Acidaminococcus fermentans DSM 20731. The genome of Clostridium cochlearium is not yet sequenced. (DOC 486 KB) |
| Databáze: |
OpenAIRE |
| Externí odkaz: |
|
