Genome-wide association study of seedling stage salinity tolerance in temperate japonica rice germplasm
| Autor: | Gulzhamal Dyuskalieva, B. N. Usenbekov, A.B. Rysbekova, Hei Leung, Russell F. Reinke, Georgina V. Vergara, Xiaolin Li, Changrong Ye, Benedick Labaco, Dariga Batayeva |
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| Rok vydání: | 2016 |
| Předmět: |
0106 biological sciences
0301 basic medicine Germplasm Seedling stage Candidate gene lcsh:QH426-470 Quantitative Trait Loci Biology Quantitative trait locus Oryza 01 natural sciences Genome Polymorphism Single Nucleotide Genome-wide association studies 03 medical and health sciences Genetics Temperate climate Genetics (clinical) fungi Sodium food and beverages Salt Tolerance Marker-assisted selection biology.organism_classification humanities Salinity tolerance Salinity lcsh:Genetics Horticulture 030104 developmental biology Seedlings Potassium Temperate japonica 010606 plant biology & botany Genome-Wide Association Study Research Article |
| Zdroj: | BMC Genetics BMC Genetics, Vol 19, Iss 1, Pp 1-11 (2018) |
| ISSN: | 1471-2156 |
| Popis: | Background Salinity has a significant impact on rice production in coastal, arid and semi-arid areas in many countries, including countries growing temperate rice, such as Kazakhstan. Recently, the complete genomes of 3000 rice accessions were sequenced through the 3 K rice genome project, and this set included 203 temperate japonica rice accessions. To identify salinity-tolerant germplasm and related genes for developing new salinity-tolerant breeding lines for the temperate japonica rice growing regions, we evaluated the seedling stage salinity tolerance of these sequenced temperate japonica rice accessions, and conducted genome-wide association studies (GWAS) for a series of salinity tolerance related traits. Results There were 27 accessions performed well (SES |
| Databáze: | OpenAIRE |
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