Reichenbachiella faecimaris sp. nov., isolated from a tidal flat, and emended descriptions of the genus Reichenbachiella and Reichenbachiella agariperforans
| Autor: | Jaesoo Yoo, A-Rum Park, Chae-Sung Lim, Dong-Hyun Roh, Byoung-Joon Park, Je-Kwan Lee, Sung-Keun Rhee, Dong-Hun Lee, In-Tae Cha, Yong-Sik Oh, Soo-Je Park |
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| Rok vydání: | 2010 |
| Předmět: |
Bacterial gliding
DNA Bacterial food.ingredient Cytophagaceae Molecular Sequence Data Biology medicine.disease_cause Microbiology DNA Ribosomal food Reichenbachiella Fulvivirga RNA Ribosomal 16S Botany medicine Reichenbachiella faecimaris Seawater Ecology Evolution Behavior and Systematics Phylogeny Fabibacter Fatty Acids General Medicine Ribosomal RNA 16S ribosomal RNA Roseivirga |
| Zdroj: | International journal of systematic and evolutionary microbiology. 61(Pt 8) |
| ISSN: | 1466-5034 |
| Popis: | A taxonomic study was carried out on two bacterial strains, PCP11T and PCP104, isolated from a tidal flat of the Yellow Sea, Korea. Comparative 16S rRNA gene sequence studies showed that these strains belonged to the family Cytophagaceae, phylum Bacteroidetes. Strains PCP11T and PCP104 shared 99.4 % sequence similarity and were related most closely to Reichenbachiella agariperforans KMM 3525T (95.8 and 96.0 % sequence similarity, respectively). Members of the genera Fulvivirga, Roseivirga, Fabibacter and Marinoscillum were the next closest relatives of the new isolates, with sequence similarities ≤91 %. The two isolates were Gram-staining-negative, strictly aerobic, gliding bacteria. They grew in the presence of 1–5 % NaCl, at pH 5.5–8.5 and at 4–35 °C. Strains PCP11T and PCP104 shared a number of physiological and biochemical properties with Reichenbachiella agariperforans KMM 3525T, but they differed from this strain in the hydrolysis of biopolymers and in the production of carotenoid and flexirubin-type pigments. Both strains possessed iso-C15 : 0, summed feature 4 (C16 : 1ω7c and/or iso-C15 : 0 2-OH) and C15 : 0 as major cellular fatty acids. The major respiratory quinone was menaquinone 7 (MK-7). The G+C contents of the genomic DNA of strains PCP11T and PCP104 were 39.6 and 41.9 mol%, respectively. On the basis of phenotypic data and phylogenetic inference, it is proposed that the two isolates represent a novel species, Reichenbachiella faecimaris sp. nov., with strain PCP11T ( = KACC 14523T = JCM 16588T) as the type strain. Emended descriptions of the genus Reichenbachiella and Reichenbachiella agariperforans are also proposed. |
| Databáze: | OpenAIRE |
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