Additional file 1 of CoMI: consensus mutual information for tissue-specific gene signatures

Autor: Huang, Sing-Han, Lo, Yu-Shu, Luo, Yong-Chun, Chuang, Yi-Hsuan, Lee, Jung-Yu, Yang, Jinn-Moon
Rok vydání: 2022
DOI: 10.6084/m9.figshare.19618200.v1
Popis: Additional file 1: Fig. S1. The correlations of the ranking of all genes were compared between CoMI, T-test, FC, and SAM in five cancer types. Fig. S2. The odds ratios of tissue-specific genes selected by CoMI and SAM in five cancer types, including LIHC, GBM, BRCA, and COAD. Fig. S3. Boxplot for the results of the ranking of tissue-specific genes identified by CoMI and T-test in five cancer types. Fig. S4. Boxplot for the results of the ranking of tissue-specific genes identified by CoMI and SAM in five cancer types. Fig. S5. Comparisons between CoMI and COPA for tissue-specific properties in five cancer types. Fig. S6. Kaplan–Meier plots representing patients stratified by the auto-select best cutoff of top-ranked 10 genes identified by CoMI in GBM. Fig. S7. The distributions of CoMI values with different SMI and SDist values. Fig. S8. The relationship between SMI, SDist, and tissue-specific genes.
Databáze: OpenAIRE