Complete chloroplast genome sequence of Gigantochloa verticillata (Bambusodae)
| Autor: | Yushan Zheng, Ting Zhao, Jundong Rong, Lili Fan, Yangyang Zhang, Feng-Ying Zheng, Liguang Chen |
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| Rok vydání: | 2020 |
| Předmět: |
0106 biological sciences
0301 basic medicine Whole genome sequencing Biology phylogeny 010603 evolutionary biology 01 natural sciences Gigantochloa verticillata Chloroplast 03 medical and health sciences 030104 developmental biology Phylogenetics Botany plastid genome Genetics China Molecular Biology Mitogenome Announcement Research Article Bambusodae |
| Zdroj: | Mitochondrial DNA. Part B, Resources article-version (VoR) Version of Record |
| ISSN: | 2380-2359 |
| DOI: | 10.1080/23802359.2019.1702484 |
| Popis: | Gigantochloa verticillata is produced in Mengla and Jinghong, Yunnan Province, China, and cultivated in Hong Kong. Vietnam, Thailand, India, Indonesia, and Malaysia are distributed and cultivated. We determined the complete chloroplast genome sequence for G. verticillata using Illumina sequencing data. The complete chloroplast sequence is 139,489 bp, including large single-copy (LSC) region of 83,062 bp, small single-copy (SSC) region of 12,877 bp, and a pair of invert repeats (IR) regions of 21,775 bp. Plastid genome contain 132 genes, 85 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 23 chloroplast genomes indicates that G. verticillata is closely related to Dendrocalamus latiflorus in Bambusodae. |
| Databáze: | OpenAIRE |
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