Quantitative Proteomics Reveals Changes Induced by TIMP-3 on Cell Membrane Composition and Novel Metalloprotease Substrates

Autor: Simone Bonelli, Veronica M. Pravata, Stefan F. Lichtenthaler, Elisa Monaca, Matteo Calligaris, Danilo D'Apolito, Stephan A. Müller, Anna Paola Carreca, Simone D. Scilabra
Přispěvatelé: Anna Paola Carreca, Veronica Maria Pravatà, Danilo D'Apolito, Simone Bonelli, Matteo Calligaris, Elisa Monaca, Stephan A Müller, Stefan F Lichtenthaler, Simone Dario Scilabra
Jazyk: angličtina
Rok vydání: 2021
Předmět:
0301 basic medicine
Proteomics
ADAM15
Proteome
Cell
Matrix metalloproteinase
Mass Spectrometry
Cell membrane
lcsh:Chemistry
analysis [Proteome]
lcsh:QH301-705.5
proteomic
Spectroscopy
biology
Chemistry
tissue inhibitor of metalloproteases 3 (TIMP-3)
General Medicine
Transmembrane protein
Computer Science Applications
Cell biology
medicine.anatomical_structure
Ectodomain
ddc:540
TIMP3 protein
human

metalloproteinase
ectodomain shedding
metabolism [Tissue Inhibitor of Metalloproteinase-3]
Quantitative proteomics
ADAM15 protein
human

chemistry [Cell Membrane]
Catalysis
metabolism [Cell Membrane]
Article
metalloproteinases
Inorganic Chemistry
03 medical and health sciences
medicine
Disintegrin
Humans
Physical and Theoretical Chemistry
Molecular Biology
Tissue Inhibitor of Metalloproteinase-3
030102 biochemistry & molecular biology
Organic Chemistry
Cell Membrane
Membrane Proteins
metabolism [Proteome]
ADAM Proteins
030104 developmental biology
HEK293 Cells
lcsh:Biology (General)
lcsh:QD1-999
metabolism [ADAM Proteins]
biology.protein
metabolism [Membrane Proteins]
Zdroj: International Journal of Molecular Sciences
Volume 22
Issue 5
International Journal of Molecular Sciences, Vol 22, Iss 2392, p 2392 (2021)
International journal of molecular sciences 22(5), 2392-(2021). doi:10.3390/ijms22052392
ISSN: 1422-0067
Popis: Ectodomain shedding is a key mechanism of several biological processes, including cell-communication. Disintegrin and metalloproteinases (ADAMs), together with the membrane-type matrix metalloproteinases, play a pivotal role in shedding transmembrane proteins. Aberrant shedding is associated to several pathological conditions, including arthritis. Tissue inhibitor of metalloproteases 3 (TIMP-3), an endogenous inhibitor of ADAMs and matrix metalloproteases (MMPs), has been proven to be beneficial in such diseases. Thus, strategies to increase TIMP-3 bioavailability in the tissue have been sought for development of therapeutics. Nevertheless, high levels of TIMP-3 may lead to mechanism-based side-effects, as its overall effects on cell behavior are still unknown. In this study, we used a high-resolution mass-spectrometry-based workflow to analyze alterations induced by sustained expression of TIMP-3 in the cell surfaceome. In agreement with its multifunctional properties, TIMP-3 induced changes on the protein composition of the cell surface. We found that TIMP-3 had differential effects on metalloproteinase substrates, with several that accumulated in TIMP-3-overexpressing cells. In addition, our study identified potentially novel ADAM substrates, including ADAM15, whose levels at the cell surface are regulated by the inhibitor. In conclusion, our study reveals that high levels of TIMP-3 induce modifications in the cell surfaceome and identifies molecular pathways that can be deregulated via TIMP-3-based therapies.
Databáze: OpenAIRE