Long-read sequencing of benthophilinae mitochondrial genomes reveals the origins of round goby mitogenome re-arrangements
| Autor: | Irene Adrian-Kalchhauser, Jean-Claude Walser, Silvia Gutnik |
|---|---|
| Rok vydání: | 2019 |
| Předmět: |
0106 biological sciences
0301 basic medicine Mitochondrial DNA mitogenome Benthophilinae Neogobius melanostomus D-loop Transfer RNA phylogeny Biology biology.organism_classification 010603 evolutionary biology 01 natural sciences Genome 03 medical and health sciences 030104 developmental biology Evolutionary biology Phylogenetics Round goby Genetics Molecular Biology Sequence (medicine) |
| Zdroj: | Mitochondrial DNA Part B: Resources, 4 (1) |
| ISSN: | 2380-2359 |
| Popis: | Genetic innovation may be linked to evolutionary success, and indeed, the invasive round goby mitochondrial genome sequence carries two novel features not previously described in Benthophilinae. First, the round goby mitochondrial genome carries a rearrangement of the tRNA cluster Ile-Glu-Met. Second, the round goby mitochondrial genome features a 1250 bp non-coding sequence insertion downstream of the D-loop region. In this publication, we test where in the goby phylogeny the novel tRNA arrangement first arose and whether the sequence insertion is associated with invasive populations only or a genuine feature of the species. We sequence native and invasive populations in Europe and North America, and show that all round gobies carry the sequence insertion. By sequencing the tRNA cluster in selected Gobiidae, we show that the tRNA arrangement arose at the root of the Benthophilinae species radiation. Mitochondrial DNA Part B: Resources, 4 (1) |
| Databáze: | OpenAIRE |
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