The complete mitochondrial genome sequence and phylogenetic analysis for Inimicus japonicus (Scorpaeniformes: Synanceiidae)
| Autor: | Dae-Jung Kim, Jung-Hyun Kim, Jeong-In Myeong, Jae Hoon Kim, Seung-Cheol Ji, Moo-Sang Kim, Minhwan Jeong, Hyo-Won Kim |
|---|---|
| Jazyk: | angličtina |
| Rok vydání: | 2020 |
| Předmět: |
0106 biological sciences
0301 basic medicine Mitochondrial DNA biology Phylogenetic tree Base pair Scorpaeniformes Inimicus japonicasd devil stinger biology.organism_classification 010603 evolutionary biology 01 natural sciences 03 medical and health sciences Mitogenome 030104 developmental biology Synanceiidae Evolutionary biology Genetics next-generation sequencing (NGS) Molecular Biology Inimicus japonicus Mitogenome Announcement Sequence (medicine) Research Article |
| Zdroj: | Mitochondrial DNA. Part B, Resources article-version (VoR) Version of Record |
| ISSN: | 2380-2359 |
| Popis: | The complete mitochondrial genome (mitogenome) of the Inimicus japonicus was analyzed by next-generation sequencing in this study. The mitogenome is 16,978 base pairs (bp) long and codes for 22 transfer RNA (tRNA) genes, 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), and 1 non-coding control region. The overall nucleotide composition of the mitogenome is: 29.61% for A, 29.16% for T, 25.26% for C, and 15.97% for G. Twenty-two tRNAs range from 67 to 74 bp in length, and 2 rRNA (12S and 16S) were 953 and 1,687 bp long, respectively. Phylogenetic analysis by neighbor-joining (NJ) method indicated that I. japonicus showed considerable genetic similarity (82%), and had a closer relationship in the phylogenetic tree to Synanceia verrucosa. |
| Databáze: | OpenAIRE |
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