Additional file 1 of Genotype-by-environment interactions for reproduction, body composition, and growth traits in maternal-line pigs based on single-step genomic reaction norms

Autor: Chen, Shi-Yi, Freitas, Pedro H. F., Oliveira, Hinayah R., Lázaro, Sirlene F., Huang, Yi Jian, Howard, Jeremy T., Gu, Youping, Schinckel, Allan P., Brito, Luiz F.
Rok vydání: 2021
DOI: 10.6084/m9.figshare.14803880.v1
Popis: Additional file 1: Table S1. Summary of the phenotypic records used in this study before data editing and quality control. Table S2. Selection of the fixed effects, covariates, and random effects included in the final mixed animal models. Table S3. Standard errors of variance components estimates based on the homogenous (RNM1) and heterogeneous (RNM2) residuals. Table S4. Spearman’s rank correlations of genomic estimated breeding values across three representative environmental gradients. Table S5. Genomic windows with the significantly explained variances and associated candidate genes for the four traits without clear G × E interaction. Table S6. Related quantitative trait loci (QTL) within relevant genomic regions for the four traits without clear G × E interaction. Table S7. Accuracies and reliabilities of genomic estimated breeding values for all animals. Table S8. Sample sizes and accuracies used for calculating the approximate genetic correlations (weighted Pearson coefficients). Table S9. Detailed information for the candidate genes found in this study.
Databáze: OpenAIRE