Williamsia spongiae sp. nov., an actinomycete isolated from the marine sponge Amphimedon viridis
| Autor: | Wallace Rafael de Souza, Itamar Soares de Melo, Fabiana Fantinatti-Garboggini, Tiago Domingues Zucchi, Marcia Maria Parma, Rafael Sanches Afonso, Cláudia Beatriz Afonso de Menezes |
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| Rok vydání: | 2017 |
| Předmět: |
DNA
Bacterial 0301 basic medicine Microbiology 03 medical and health sciences Williamsia maris RNA Ribosomal 16S Actinomycetales mental disorders Botany Animals Phylogeny Ecology Evolution Behavior and Systematics Amphimedon viridis Base Composition biology Strain (biology) Gene tree Nucleic Acid Hybridization Sequence Analysis DNA General Medicine 16S ribosomal RNA biology.organism_classification Bacterial Typing Techniques Porifera Sponge 030104 developmental biology Williamsia Brazil Williamsia spongiae |
| Zdroj: | International Journal of Systematic and Evolutionary Microbiology. 67:1260-1265 |
| ISSN: | 1466-5034 1466-5026 |
| DOI: | 10.1099/ijsem.0.001796 |
| Popis: | A novel actinobacterium, designated isolate B138T, was isolated from the marine sponge, Amphimedon viridis, which was collected from Praia Guaeca (Sao Paulo, Brazil), and its taxonomic position was established using data from a polyphasic study. The organism showed a combination of chemotaxonomic and morphological characteristics consistent with its classification in the genus Williamsia and it formed a distinct phyletic line in the Williamsia 16S rRNA gene tree. It was most closely related to Williamsia serinedens DSM 45037T and Williamsia deligens DSM 44902T (99.0 % 16S rRNA gene sequence similarity) and Williamsia maris DSM 44693T (97.5 % 16S rRNA gene sequence similarity), but was distinguished readily from these strains by the low DNA–DNA relatedness values (62.3–64.4 %) and by the discriminatory phenotypic properties. Based on the data obtained, the isolate B138T (=CBMAI 1094T=DSM 46676T) should be classified as the type strain of a novel species of the genus Williamsia , for which the name Williamsia spongiae sp. nov. is proposed. |
| Databáze: | OpenAIRE |
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