Genome Resource for Pseudomonas sp. Strain L22-9: A Potential Novel Species with Antifungal Activity
| Autor: | Luoyi Fu, Jingling Liang, Sai Wang, Wenhan Nie, Ayizekeranmu Yiming, Bo Zhu, Gongyou Chen |
|---|---|
| Rok vydání: | 2021 |
| Předmět: |
0106 biological sciences
0301 basic medicine Genetics Whole genome sequencing biology Strain (chemistry) Pseudomonas Chromosome Genomics Plant Science biology.organism_classification 01 natural sciences Genome 03 medical and health sciences 030104 developmental biology Agronomy and Crop Science Gene GC-content 010606 plant biology & botany |
| Zdroj: | Phytopathology®. 111:425-428 |
| ISSN: | 1943-7684 0031-949X |
| DOI: | 10.1094/phyto-06-20-0241-a |
| Popis: | Pseudomonas is a complex genus with increasing numbers of new species. Recently, we isolated Pseudomonas sp. strain L22-9, which showed antifungal activity against several fungal phytopathogens. Here, we report the whole genome sequence of strain L22-9. Genomic analysis revealed that strain L22-9 contains one circular DNA chromosome of 6,730,360 bp length with 60.9% GC content. Bioinformatics analysis identified gene clusters in the genome that synthesize antimicrobial metabolites such as 2,4-diacetylphloroglucinol synthesis and hydrogen cyanide synthase. Further analysis suggests that strain L22-9 is a novel species of the genus Pseudomonas. This genome would be a valuable resource for future research in phytopathology. |
| Databáze: | OpenAIRE |
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