The Predicting Algorithm of Barrier Tree in RNA Folding Structure

Autor:	Zhendong Liu, Hailin Zhang, Fanghan Liu, Yurong Yang, Jiwei Wang
Rok vydání:	2019
Předmět:	ComputingMethodologies_PATTERNRECOGNITION ComputingMethodologies_SIMULATIONANDMODELING RNA Structure based Graph (abstract data type) Tree based Rna folding Nucleic acid structure Cluster analysis Time complexity Algorithm MathematicsofComputing_DISCRETEMATHEMATICS
Zdroj:	CIS
DOI:	10.1109/cis.2019.00078
Popis:	Computing algorithm of RNA Structure is the important in biology data mining. Biostatistics is one method of data mining, It is an NP-hard problem for prediction of RNA folding structure including pseudoknots, we investigate the RNA pseudoknotted structure based on characteristics of the RNA folding structure, and introduce the Basin Hopping Graph as a novel model of RNA folding landscape structures. The paper presented the computing algorithm of barrier tree based on the BHG. the experimental results in Rfam13.0 and PseudoBase indicate that the algorithm is more effective.
Databáze:	OpenAIRE
Externí odkaz:	https://explore.openaire.eu/search/publication?articleId=doi_________::e72c2a0ecb841c26c640e5edca277844 https://doi.org/10.1109/cis.2019.00078 Zobrazit plný text záznamu