Structural analysis of the complex of phenoxazone antibiotic actinocyl-bis(2-dimethylaminoethyl)amide with deoxytetranucleotide 5′-d(TpGpCpA) by two-dimensional 1H-NMR spectroscopy and molecular mechanics
Autor: | Alexei N. Veselkov, L. N. Djimant, Kyrill A. Veselkov, David B. Davies |
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Rok vydání: | 2005 |
Předmět: | |
Zdroj: | Molecular Biology. 39:298-305 |
ISSN: | 1608-3245 0026-8933 |
DOI: | 10.1007/s11008-005-0042-8 |
Popis: | The spatial structure of an intercalated complex of the synthetic phenoxazone antibiotic actinocyl-bis-(2-dimethylaminoethyl)amide (ActII) and the self-complementary deoxytetranucleotide 5′-d(TpGpCpA) was studied using two-dimensional NMR (2D-NOESY) spectroscopy of the complex in an aqueous solution and molecular mechanics simulation. Distinctive features of the conformation of ActII-DNA complexes were determined for two possible orientations of the ActII chromophore at the intercalation site. |
Databáze: | OpenAIRE |
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