| Autor: |
Zihan Dai, Sevillano-Rivera, Maria C., Calus, Szymon T., Q. Melina Bautista-De Los Santos, A. Murat Eren, Wielen, Paul W. J. J. Van Der, Umer Z. Ijaz, Ameet J. Pinto |
| Předmět: |
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| Popis: |
Additional file 1: Table S1. Summary of water quality parameters measured for the samples collected as part of this study. (*NM = not measured). Table S2. BioEnv analyses in vegan package to determine the subset of variables significantly correlated with community similarities. This determines the Spearman’s correlation between Euclidean distances of scaled environmental variables with the Mash distances estimated using metagenomic reads. Table S3. Distance based Redundancy Analysis using Mash distance matrix generated using pairwise Mash distances between samples estimated using metagenomic reads. Table S4. Variance Partition analysis using water chemistry/environmental parameters identified as significant being significantly associated with read-based Mash distances by dbRDA analyses. Table S5. Number of predicted open reading frames (ORFs) for each metagenome co-assembly and number annotated against the KEGG database using Kofamscan. Table S6. BioEnv analyses in vegan package to determine the subset of variables significantly correlated with similarities in functional potential of community estimates using KEGG annotation. This determines the Spearman’s correlation between Euclidean distances of scaled environmental variables with Bray Curtis distance matrix generated from RPKM of KO detected in samples. Table S7. Distance based Redundancy Analysis using pairwise Bray-Curtis distances between samples estimated using from RPKM of KO detected in samples. Table S8. Variance Partition analysis using water chemistry/environmental parameters identified as significant being significantly associated with KO Bray-Curtis distance matrix by dbRDA analyses. Table S9. Summary of modules that were significantly higher abundance in disinfected systems as compared to non-disinfected systems. Table S10. Summary of modules that were significantly higher abundance in non-disinfected systems as compared to disinfected systems. |
| Databáze: |
OpenAIRE |
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