K-means clustering of zebrafish embryos images acquired with AOTF-based hyperspectral microscope

Autor:	A B Burlakov, S V Shirokov, C C Huang, D D Khokhlov
Rok vydání:	2021
Předmět:	History Computer Science Applications Education
Zdroj:	Journal of Physics: Conference Series. 2127:012062
ISSN:	1742-6596 1742-6588
DOI:	10.1088/1742-6596/2127/1/012062
Popis:	Model organism studies are widely implemented in biomedical research fields. Zebrafish is a common and convenient model organism. To provide in vivo investigation of living zebrafish the non-invasive imaging methods are implemented. Hyperspectral imaging utilizing acousto-optic tunable filters is a perspective modality for zebrafish embryos and larvae automated observation. In this paper, the hyperspectral microscope based on the acousto-optical tunable filter is described. Using the hyperspectral image arrays obtained with the described setup, the K-means clustering algorithm is tested. The results obtained for different number of clusters are presented and discussed.
Databáze:	OpenAIRE
Externí odkaz:	https://explore.openaire.eu/search/publication?articleId=doi_________::c4e8e91cef261a981919c107d008d782 https://doi.org/10.1088/1742-6596/2127/1/012062 Zobrazit plný text záznamu