A quantitative model for age-dependent expression of the p16INK4a tumor suppressor

Autor: Tsygankov, D., Elston, T. C., Sanoff, H. K., Liu, Y., Sharpless, N. E.
Jazyk: angličtina
Rok vydání: 2009
Předmět:
DOI: 10.17615/dydv-v356
Popis: Recent work has shown that expression of the p16INK4a tumor suppressor increases with chronological age. Expression is accelerated by gerontogenic behaviors such as tobacco use and physical inactivity, and is also influenced by allelic genotype of a polymorphic single nucleotide polymorphism (SNP) rs10757278 that is physically linked with the p16INK4a ORF. To understand the relationship between p16INK4a expression, chronologic age, subject characteristics and host genetics, we sought to develop a mathematical model that links p16INK4a expression with aging. Using an annotated dataset of 170 healthy adults for whom p16INK4a expression and subject genotypes were known, we developed two alternative stochastic models that relate p16INK4a expression to age, smoking, exercise and rs10757278 genotype. Levels of p16INK4a increased exponentially and then saturated at later chronologic ages. The model, which best fit the data, suggests saturation occurs because of p16INK4a-dependent attrition of subjects at older chronologic ages, presumably due to death or chronic illness. An important feature of our model is that factors that contribute to death in a non p16INK4a-dependent manner do not affect our analysis. Interestingly, tobacco-related increases in p16INK4a expression are predicted to arise from a decrease in the rate of p16INK4a-dependent death. This analysis is most consistent with the model that p16INK4a expression monotonically increases with age, and higher expression is associated with increased subject attrition.
Databáze: OpenAIRE