Additional file 2 of Unmasking viral sequences by metagenomic next-generation sequencing in adult human blood samples during steroid-refractory/dependent graft-versus-host disease

Autor: Zanella, M. C., S. Cordey, F. Laubscher, M. Docquier, G. Vieille, C. Van Delden, V. Braunersreuther, Mc Kee TA, J. A. Lobrinus, S. Masouridi-Levrat, Y. Chalandon, L. Kaiser, D. L. Vu
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Popis: Additional file 1: Table S1. Detailed mNGS results per patient for the 25 adult allo-HSCT patients. Table S2. Comparison of mNGS results on the pooled plasma samples and of the routine r(RT-)PCR results on the corresponding plasma samples of the 25 patients. Figure S1. Boxplot of mapped reads of DNA viruses and corresponding mRNA detection with mNGS. The vertical axis represents the number of mapped reads. The horizontal axis represents all identified viral sequences of DNA viruses (left panel) and corresponding mRNA sequences (right panel). The numbers on the horizontal axis represent the number of patients in which sequences of each virus were identified. Abbreviations: HSV-1: herpes simplex 1 virus; CMV: cytomegalovirus; EBV: Epstein-Barr virus; TTMDV: torque teno midivirus; TTMV: torque teno minivirus; TTV: torque teno virus.
Databáze: OpenAIRE