| Autor: |
Kedibone Ndlangisa, Plessis, Mignon Du, Mushal Allam, Wolter, Nicole, Thabo Mohale, Gouveia, Linda De, Birkhead, Monica, Klugman, Keith, Gottberg, Anne Von |
| Rok vydání: |
2016 |
| DOI: |
10.6084/m9.figshare.c.3620999_d4.v1 |
| Popis: |
Core genome phylogeny of a non-serotypeable isolate and serotype 18C isolates from South Africa. The tree represents phylogenetic comparison of the core genome of two isolates that were co-detected during a single episode of invasive disease in South Africa in 2010 [serotype 18C and non-serotypeable (NT)] and genomes of serotype 18C isolates (nâ =â 58) that caused invasive disease in South Africa from 2005 to 2013. This maximum likelihood tree was built using core gene sequences which were concatenated and aligned, using MUSCLE (EMBL-EBI). The numbers at the nodes indicate RAxML bootstrap values. Branch lengths are proportional to the number of substitutions per site (see the scale bars). The colour coding is according to sequence type (ST). (PDF 164Â kb) |
| Databáze: |
OpenAIRE |
| Externí odkaz: |
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