Overview of NCBI's SARS-CoV-2 submission process and the metadata required v5

Autor: Ruth Timme, Emma Griffiths, Lee Katz, Michael Weigand, Technical Outreach and Assistance for States Team
Rok vydání: 2022
DOI: 10.17504/protocols.io.b35iqq4e
Popis: PURPOSE: This protocol explains the metadata requirements for the following two protocols: 1. SARS-CoV-2 NCBI submission protocol: SRA, BioSample, and BioProject Step-by-step instructions for establishing a new NCBI laboratory submission account and for creating and linking a new BioProject to an existing umbrella effort. SARS-CoV-2 raw data submission to SRA (Sequence Read Archive) and metadata to BioSample. Users can modify this protocol to just create a BioSample with no linked raw data. 2. SARS-CoV-2 NCBI consensus submission protocol: GenBank Required: established BioProject and BioSamples Submit SARS-CoV-2 assemblies to NCBI GenBank, linking to existing BioProject, BioSamples, and raw data. Version history: V5: Updated metadata templates (BioSample) for minor edit
Databáze: OpenAIRE