Insights into the genomic repertoire of Aquimarina litoralis CCMR20, a symbiont of coral Mussismilia braziliensis
| Autor: | Fabiano L. Thompson, Ana Paula B. Moreira, Gizele D. Garcia, Diogo A. Tschoeke, Tooba Varasteh, Cristiane C. Thompson, Arthur Weiss da Silva Lima |
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| Rok vydání: | 2021 |
| Předmět: |
Genetics
Whole genome sequencing 0303 health sciences food.ingredient 030306 microbiology Accession number (library science) Aquimarina General Medicine Ribosomal RNA Biology Biochemistry Microbiology Genome 03 medical and health sciences food Molecular Biology Gene Genome size Illumina dye sequencing 030304 developmental biology |
| Zdroj: | Archives of Microbiology. 203:2743-2746 |
| ISSN: | 1432-072X 0302-8933 0000-0000 |
| DOI: | 10.1007/s00203-021-02194-w |
| Popis: | Aquimarina litoralis CCMR20 originated from the coral Mussismilia braziliensis (Sebastiao Gomes Reef, Brazil, summer 2010). To gain new insights into the genomic repertoire associated with symbioses, we obtained the genome sequence of this strains using Illumina sequencing. CCMR20 has a genome size of 6.3 Mb, 32.6%GC, and 5513 genes (37 tRNA and 4 rRNA). A more fine-grained examination of the gene repertoire of CCMR20 disclosed genes engaged with symbiosis (heterotrophic carbon metabolism, CAZymes, B-vitamins group, carotenoid pigment and antioxidant molecules production). Genomic evidence further expand the possible relevance of this symbiont in the health of Mussismilia holobiont.Whole Genome Shotgun project has been deposited at DDBJ/ENA/GeneBank under the accession number WEKL00000000. |
| Databáze: | OpenAIRE |
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