Density-Functional and Electrostatic Calculations for a Model of a Manganese Superoxide Dismutase Active Site in Aqueous Solution

Autor: Cindy L. Fisher, Louis Noodleman, Jian Li, Jun-Liang Chen, Donald Bashford
Rok vydání: 1996
Předmět:
Zdroj: The Journal of Physical Chemistry. 100:13498-13505
ISSN: 1541-5740
0022-3654
DOI: 10.1021/jp960713x
Popis: We have calculated the redox potential for a solvated manganese superoxide dismutase active-site model by immersing the solute described quantum mechanically into a continuum dielectric representation of an aqueous environment. Active-site models containing 37 or 38 atoms representing the side chains of the 5 ligands3 histidine residues, 1 aspartate, and 1 hydroxide or water moleculeand the manganese ion were constructed from X-ray crystal structure coordinates. The electronic structure of the active-site model was determined quantum mechanically using density-functional methods. The resultant ESP molecular charge distribution was then used to compute the reaction field potential between the active-site model and aqueous solvent by finite difference solutions to the Poisson−Boltzmann equation. This aqueous system was then coupled back into the molecular Hamiltonian and the process iterated to self-consistency. Electron-relaxation effects in the redox process were assessed and found to be important in the ...
Databáze: OpenAIRE