| Autor: |
Touati Abdelaziz, Mairi Assia |
| Rok vydání: |
2019 |
| Předmět: |
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| Zdroj: |
Current Research in Bioinformatics. 8:14-17 |
| ISSN: |
2524-2172 |
| DOI: |
10.3844/ajbsp.2019.14.17 |
| Popis: |
The aim of this study is to make comparison of IncL/M groups on basis of two genes candidates’ repA and excA genes. The sequences of 27 plasmids were compared using the neighbor-joining method. This method was used to construct a phylogenetic tree for the nucleotide sequences of two genes (repA and excA), using the program MEGA X software. The evolutionary distances were computed using the maximum composite likelihood method. The neighbor-joining method analysis showed different results based on the gene used for comparison. The repA gene was more accurate than excA gene to distinguish between different incL/M plasmids. This study suggested that IncL/M plasmids harboring different antibiotic resistance genes have evolved differently. |
| Databáze: |
OpenAIRE |
| Externí odkaz: |
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