Pseudomonas juntendi sp. nov., isolated from patients in Japan and Myanmar
| Autor: | Tatsuya Tada, Masahiro Shimojima, Mari Tohya, Kanae Teramoto, Teruo Kirikae, Htay Htay Tin, Kyoko Kuwahara-Arai, San Mya, Shin Watanabe, May Wint War |
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| Rok vydání: | 2019 |
| Předmět: |
0106 biological sciences
0301 basic medicine Phylogenetic tree biology Strain (chemistry) Pseudomonas monteilii Pseudomonas General Medicine biology.organism_classification 16S ribosomal RNA rpoB 010603 evolutionary biology 01 natural sciences Microbiology Pseudomonas putida Housekeeping gene 03 medical and health sciences 030104 developmental biology Ecology Evolution Behavior and Systematics |
| Zdroj: | International Journal of Systematic and Evolutionary Microbiology. 69:3377-3384 |
| ISSN: | 1466-5034 1466-5026 |
| DOI: | 10.1099/ijsem.0.003623 |
| Popis: | A Gram-negative, aerobic, rod-shaped, non-spore-forming bacterium, designated as strain BML3T, was isolated from a sputum sample of a hospital patient in Japan. Strain BML3T grew at temperatures from 4 to 40 °C, in 1.0–7.0 % (w/v) NaCl and at pH 6.0–9.0. Results of phylogenetic analysis based on the sequences of housekeeping genes, including the 16S rRNA gene and rpoB, rpoD and gyrB, showed that strain BML3T was part of the Pseudomonas putida group and located close to Pseudomonas asiatica , Pseudomonas monteilii and P. putida . Whole-genome comparisons, using average nucleotide identity and digital DNA–DNA hybridization, confirmed strain BML3T to be a distinct species among the P. putida group. Phenotypic characterization tests demonstrated that the utilization of phenylmercuric acetate could distinguish this strain from other closed species of the P. putida group. Based on genetic and phenotypic evidence, strain BML3T should be classified as a novel species, for which the name Pseudomonas juntendi sp. nov. is proposed. The type strain is BML3T (=DSM 109244T,=JCM 33395T), with a DNA G+C content of 62.66 mol %. |
| Databáze: | OpenAIRE |
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