A new and improved method of library preparation for non-invasive prenatal testing: plasma to library express technology
| Autor: | Meihong Ren, Guangxin Sun, Xiangsha Kong, Lin Zhang, Ying Ji, Huiying Rao, Liuyezi Du, Xiaohong Zhang, Qixi Wu |
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| Rok vydání: | 2023 |
| Předmět: | |
| Zdroj: | Clinical Chemistry and Laboratory Medicine (CCLM). 61:999-1004 |
| ISSN: | 1437-4331 1434-6621 |
| DOI: | 10.1515/cclm-2022-0283 |
| Popis: | Objectives This study aims to develop a novel library preparation method, plasma to library express technology (PLET), to construct next-generation sequencing (NGS) libraries directly from plasma without cell-free DNA (cfDNA) isolation. Methods Peripheral blood samples (600) were obtained from a retrospective cohort of 300 pregnant women prior to invasive diagnostic testing. The samples were subsequently distributed between library preparation methodologies, with 300 samples prepared by PLET and 300 by conventional methods for non-invasive prenatal testing (NIPT) to screen for common trisomies using low-pass whole genome next generation sequencing. Results NIPT conducted on PLET libraries demonstrated comparable metrics to libraries prepared using conventional methods, including 100% sensitivity and specificity. Conclusions Our study demonstrates the potential utility of PLET in the clinical setting and highlights its significant advantages, including dramatically reduced process complexity and markedly decreased turnaround time. |
| Databáze: | OpenAIRE |
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