High Frequency Mutant Genes in Urothelial Carcinoma Based On Genomic Landscape

Autor: Haifeng Hao, Yunmeng Zhang, Yue Zheng, Xiaoting Yan, Liang wei, Xiaofeng Yang
Rok vydání: 2021
DOI: 10.21203/rs.3.rs-1006840/v1
Popis: ObjectiveThe new generation of sequencing technology has been applied to the study of genomic genetic characteristics of urothelial carcinoma for 20 years. Researchers at home and abroad have done a lot of research work. Analyzing and summarizing the research results, we can clarify the genes with high-frequency mutations, which is of great significance for the screening of biomarkers and molecular targets of urothelial carcinoma.Method We will adopt the PICOS analysis method of evidence-based medicine; follow the principles of systematic evaluation and meta-analysis; formulate literature retrieval keywords and retrieval strategies; determine the inclusion criteria; and statistically analyze the name, mutation frequency, quantity, and the total number of times in repeated reports of significant mutant genes in the genomic landscape.Results A total of 6254 cases of urothelial carcinoma were sequenced in the 27 theses selected. Sequencing methods include whole genome sequencing, whole exome sequencing, and target exome sequencing. 27 genomic landscapes of urothelial carcinoma showed that the number of significant mutant genes was 5-58, with an average of 26 reported in each paper. There were 273 genes with significant mutations in urothelial carcinoma, 65.57% (179 / 273) of which were reported only once and 34.43% (94 / 273) were reported more than twice. The top 7 genes most frequently reported were TP53, PIK3CA, FGFR3, KDM6A, ARID1A , RB1 and STAG2.Conclusion There were 273 genes with significant mutations in the genome of urothelial carcinoma, and biomarkers may be selected from 94 genes with high-frequency of mutations.
Databáze: OpenAIRE