Mutation rate analysis at 19 autosomal microsatellites

Autor: Han-Ting Fan, Ling-Li Hu, Kai Li, Feng Chen, Steven Haigh, Qiang Ji, Xiao-Qin Qian, Hao-Fang Mu, Fan-Li Bu, Jian-Wen Wang, Yanfang Yu, Caiyong Yin
Rok vydání: 2015
Předmět:
Zdroj: ELECTROPHORESIS. 36:1633-1639
ISSN: 0173-0835
Popis: Previous studies have demonstrated that a large sample size is needed to reliably estimate population- and locus-specific microsatellite mutation rates. Therefore, we conducted a long-term collaboration study and performed a comprehensive analysis on the mutation characteristics of 19 autosomal short tandem repeat (STR) loci. The STR loci located on 15 of 22 autosomal chromosomes were analyzed in a total of 21,106 samples (11,468 parent-child meioses) in a Chinese population. This provided 217,892 allele transfers at 19 STR loci. An overall mutation rate of 1.20 × 10(-3) (95% CI, 1.06-1.36 × 10(-3) ) was observed in the populations across 18 of 19 STR loci, except for the TH01 locus with no mutation found. Most STR mutations (97.7%) were single-step mutations, and only a few mutations (2.30%) comprised two and multiple steps. Interestingly, approximately 93% of mutation events occur in the male germline. The mutation ratios increased with the paternal age at child birth (r = 0.99, p
Databáze: OpenAIRE