A novel approach to compress dna repetative sequences in bio-informatics

Autor:	Samparthi V. S. Kumar, Vmnssvkr Gupta, Deepak Nedunuri, S. M. B. Chowdary
Rok vydání:	2019
Předmět:	History chemistry.chemical_compound chemistry Computer science Bio informatics Computational biology DNA Computer Science Applications Education
Zdroj:	Journal of Physics: Conference Series. 1228:012026
ISSN:	1742-6596 1742-6588
Popis:	In recent days numbers of gigabyte sequences of nucleotides are stored in a common database Genbank. All the victimization Deoxyribonucleic acid sequences for biological functions are to store the large number of Genomes in a compressed type in economically. Despite the fact that Deoxyribonucleic corrosive arrangements are put away in a packed kind, the information on Deoxyribonucleic corrosive groupings square measure hang on in science databases. For a four-letter alphabet in DNA (Adenine(A), Cytosine(C), Guanine(G) and Thymine(T)), an average description length of 2 bits per base is that the max length required to encode DNA. To reexamine the previous art of compression techniques and its merits and de merits, a novel attempt is initiated. Based on the comparative study of existing algorithms a new method proposed for DNA compression without depending on statistics of sequence set.
Databáze:	OpenAIRE
Externí odkaz:	https://explore.openaire.eu/search/publication?articleId=doi_________::0008cd2366a79aa16c7370498f4b4424 https://doi.org/10.1088/1742-6596/1228/1/012026 Zobrazit plný text záznamu