Presence of cucurbit viruses in Ankara and Antalya province and molecular characterization of coat protein gene of zucchini yellow mosaic virus turkish isolates
| Autor: | Topkaya, Serife, Desbiez, Cecile, Ertunc, Filiz |
|---|---|
| Přispěvatelé: | Faculty of Agriculture, Department of Plant Protection, Ankara University, Station de Pathologie Végétale (AVI-PATHO), Institut National de la Recherche Agronomique (INRA), Ankara University Scientific Research Projects Division (BAP) coded 12B4347002, Unité de Pathologie Végétale (PV) |
| Jazyk: | angličtina |
| Rok vydání: | 2019 |
| Předmět: |
[SDV.SA]Life Sciences [q-bio]/Agricultural sciences
virus phytopathogène molecular variability cucurbitacees analyse phylogénétique culture légumière de plein champ turquie [SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy Zucchini yellow mosaic virus coat protein phytopathogenic virus cucurbit viruses [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology pathologie végétale |
| Zdroj: | Fresenius Environmental Bulletin Fresenius Environmental Bulletin, 2019, 28 (4), pp.2442-2449 |
| ISSN: | 1018-4619 |
| Popis: | Cucurbits are widely grown vegetables in different provinces of Turkey. However their production is restricted by pests and pathogens including different plant viruses, among which Zucchini yellow mosaic virus (ZYMV) is particularly damaging. Infections by this virus during the early stages of plant development causes deformation of fruits and significant yield losses. During 2009-2014, 221 cucurbits samples were collected from fields and greenhouses from different provinces of Turkey. Serological testing was performed by double antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA) for presence of Watermelon mosaic virus (WMV), ZYMV, Cucumber mosaic virus (CMV), Papaya ring spot virus (PRSV), cucumber green mottle mosaic virus (CGMMV) and Squash mosaic virus (SqMV). For molecular analaysis of ZYMV, full-length CP nucleotide sequences were obtained for 45 ZYMV isolates and compared with sequences from worldwide isolates available in databases. The CP coding regions of Turkish ZYMV were 837 nt long and encoded 279 amino acids (aa). Forty two isolates from different regions were classified in the molecular subgroup Al, the most frequent in the Mediterranean Basin, Europe and Africa. Three isolates collected from Antalya region were classified in subgroup A4 and showed 99 % sequence identity with isolates from the same subgroup that have emerged recently in France. |
| Databáze: | OpenAIRE |
| Externí odkaz: |
|