16 th IHIW: Extending the number of resources and bioinformatics analysis for the investigation of HLA rare alleles
| Autor: | F. F. Gonzalez-Galarza, S. J. Mack+, J. Hollenbach+, M. Fernandez-Vina?, M. Setterholm§, J. Kempenich§, S. G. E. Marsh¶, A. R. Jones, D. Middleton, the HLA Rare Allele Consortium1 (The HLA Rare Allele Consortium: Ana Alfirevic (Liverpool, UK), Michael Aubrey (Aurora, USA), Mats Bengtsson (Uppsala, Sweden), Maria da Graca Bicalho (Curitiba, Brazil), Irina Bohme (Dresden, Germany), Juliette Brown (London, Angelica Canossi (L'Aquila, Italy), Carlo Carcassi (Cagliari, Vaughan Carter (Newcastle, Steven Cate (Oklahoma, Chu Chen-Chung (Taipei, Taiwan), Frans Claas (Leiden, Netherlands), Noel Collins (Sheffield, John Crowley (Dublin, Ireland), Chris Darke (Cardiff, Natalia Diaz-Burlinson (London, Anne Dormoy (Besancon, France), Valerie Dubois (Lyon, Paul Dunn (Auckland, New Zealand), Ingrid Fae (Vienna, Austria), Gabriella Ficai (Genova, Gottfried Fischer (Vienna, Adrian Fleet (Adelaide, Australia), Katharina Fleischhauer (Milan, Sara Frison (Milan, Lucia Garbarino (Genova, Clara Godorezky (Mexico City, Mexico), Reyna Goodman (Cambrige, Zorana Grubic (Zagreb, Croatia), Franca Rosa Guerini (Milan, Milena Ivanova (Sofia, Bulgaria), Pavel Jindra (Pilsen, Czech Republic), Shirley Jobson (Birmingham, Gurvinder Kaur (New Delhi, Sridhar Kesireddy (Hyderabad, India), Edward KL Yang (Hualien, Sara Lai (Cagliari, Benedicte Lie (Oslo, Norway), Dario Ligeiro (Lisbon, Portugal), Ann-Margaret Little (Glasgow, Pascale Loiseau (Paris, Marja-Liisa Lokki (Helsinki, Finland), Elena Longhi (Milan, Alberto Malagoli (Brescia, Miryiam Martinetti (Pavia, Emeline Masson (Paris, Sibelle Mattar (Curitiba, Maria Elisa Moraes (Rio de Janeiro, Victor Morales (Buenos Aires, Argentina), Barbara Murgia (Genova, Joannis Mytilineos (Ulm, Sonia Nesci (Pesaro, Giuseppina Ozzella (Rome, Chryssa Papasteriades (Athens, Greece), Juha Perasaari (Helsinki, Shalini Pereira (Seattle, Francesca Poli (Milan, Katherine Poole (Leeds, Bernardino Porfirio (Florence, Kay Poulton (Manchester, Gisele Rampim (Sao Paulo, Fernanda Ribas (Curitiba, Lucie Richard (Montreal, Canada), Dave Roelen (Leiden, Carley Shaut (Portland, Linda Smith (Perth, Maggie Sprague (Seattle, Franco Tavarozzi (London, Sofia Tavoularis (Ottawa, Manuela Testi (Rome, Jean- Marie Tiercy (Geneva, Switzerland), Margareth Torres (Sao Paulo, Hien Tran (Heidelberg, Shankarkumar Umapathy (Mumbai, Tiziana Valentini (Rome, Michael Varney (Melbourne, Cinzia Vecchiato (Bolzano, Petra Venigova (Pilsen, Silvia Vidal (Barcelona, Spain), Blanka Vidan-Jeras (Ljubljana, Solvenia), Alan Walkinshaw (Glasgow, John Ward (Bristol, Campbell Witt (West Australia, Georgena Wohlwend (Seattle, Elizabeth Wroe (Bristol, Chanfu Zhu (Jinan, China), Renata Zunec (Zagreb, Croatia). © 2012 Blackwell Publishing Ltd International Journal of Immunogenetics, 2013, 60-65 Resources for the investigation of rare alleles 65 |
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| Jazyk: | angličtina |
| Rok vydání: | 2013 |
| Předmět: | |
| Zdroj: | International journal of immunogenetics 40 (2013): 60–65. doi:10.1111/iji.12030 info:cnr-pdr/source/autori:F. F. Gonzalez-Galarza*, S. J. Mack+, J. Hollenbach+, M. Fernandez-Vina?, M. Setterholm§, J. Kempenich§, S. G. E. Marsh¶, A. R. Jones*, D. Middleton** & the HLA Rare Allele Consortium1 (The HLA Rare Allele Consortium: Ana Alfirevic (Liverpool, UK), Michael Aubrey (Aurora, USA), Mats Bengtsson (Uppsala, Sweden), Maria da Graca Bicalho (Curitiba, Brazil), Irina Bohme (Dresden, Germany), Juliette Brown (London, UK), Angelica Canossi (L'Aquila, Italy), Carlo Carcassi (Cagliari, Italy), Vaughan Carter (Newcastle, UK), Steven Cate (Oklahoma, USA), Chu Chen-Chung (Taipei, Taiwan), Frans Claas (Leiden, Netherlands), Noel Collins (Sheffield, UK), John Crowley (Dublin, Ireland), Chris Darke (Cardiff, UK), Natalia Diaz-Burlinson (London, UK), Anne Dormoy (Besancon, France), Valerie Dubois (Lyon, France), Paul Dunn (Auckland, New Zealand), Ingrid Fae (Vienna, Austria), Gabriella Ficai (Genova, Italy), Gottfried Fischer (Vienna, Austria), Adrian Fleet (Adelaide, Australia), Katharina Fleischhauer (Milan, Italy), Sara Frison (Milan, Italy), Lucia Garbarino (Genova, Italy), Clara Godorezky (Mexico City, Mexico), Reyna Goodman (Cambrige, UK), Zorana Grubic (Zagreb, Croatia), Franca Rosa Guerini (Milan, Italy), Milena Ivanova (Sofia, Bulgaria), Pavel Jindra (Pilsen, Czech Republic), Shirley Jobson (Birmingham, UK), Gurvinder Kaur (New Delhi, UK), Sridhar Kesireddy (Hyderabad, India), Edward KL Yang (Hualien, Taiwan), Sara Lai (Cagliari, Italy), Benedicte Lie (Oslo, Norway), Dario Ligeiro (Lisbon, Portugal), Ann-Margaret Little (Glasgow, UK), Pascale Loiseau (Paris, France), Marja-Liisa Lokki (Helsinki, Finland), Elena Longhi (Milan, Italy), Alberto Malagoli (Brescia, Italy), Miryiam Martinetti (Pavia, Italy), Emeline Masson (Paris, France), Sibelle Mattar (Curitiba, Brazil), Maria Elisa Moraes (Rio de Janeiro, Brazil), Victor Morales (Buenos Aires, Argentina), Barbara Murgia (Genova, Italy), Joannis Mytilineos (Ulm, Germany), Sonia Nesci (Pesaro, Italy), Giuseppina Ozzella (Rome, Italy), Chryssa Papasteriades (Athens, Greece), Juha Perasaari (Helsinki, Finland), Shalini Pereira (Seattle, USA), Francesca Poli (Milan, Italy), Katherine Poole (Leeds, UK), Bernardino Porfirio (Florence, Italy), Kay Poulton (Manchester, UK), Gisele Rampim (Sao Paulo, Brazil), Fernanda Ribas (Curitiba, Brazil), Lucie Richard (Montreal, Canada), Dave Roelen (Leiden, Netherlands), Carley Shaut (Portland, USA), Linda Smith (Perth, Australia), Maggie Sprague (Seattle, USA), Franco Tavarozzi (London, UK), Sofia Tavoularis (Ottawa, Canada), Manuela Testi (Rome, Italy), Jean-Marie Tiercy (Geneva, Switzerland), Margareth Torres (Sao Paulo, Brazil), Hien Tran (Heidelberg, Germany), Shankarkumar Umapathy (Mumbai, India), Tiziana Valentini (Rome, Italy), Michael Varney (Melbourne, Australia), Cinzia Vecchiato (Bolzano, Italy), Petra Venigova (Pilsen, Czech Republic), Silvia Vidal (Barcelona, Spain), Blanka Vidan-Jeras (Ljubljana, Solvenia), Alan Walkinshaw (Glasgow, UK), John Ward (Bristol, UK), Campbell Witt (West Australia, Australia), Georgena Wohlwend (Seattle, USA), Elizabeth Wroe (Bristol, UK), Chanfu Zhu (Jinan, China) and Renata Zunec (Zagreb, Croatia). © 2012 Blackwell Publishing Ltd International Journal of Immunogenetics, 2013, 40, 60-65 Resources for the investigation of rare alleles 65/titolo:16 th IHIW: Extending the number of resources and bioinformatics analysis for the investigation of HLA rare alleles/doi:10.1111%2Fiji.12030/rivista:International journal of immunogenetics (Print)/anno:2013/pagina_da:60/pagina_a:65/intervallo_pagine:60–65/volume:40 |
| Popis: | Continuing a project presented at the 15th International HLA and Immunogenetics Workshop (IHIWS) on the rarity of HLA alleles, we sought to expand the number of data sources and bioinformatics tools available in the Allele Frequencies Net Database website (AFND, www.allelefrequencies.net). In this 16th IHIWS Rare Alleles project, HLA alleles described in the latest IMGT/HLA Database (release 3.8.0) were queried against different sources including data from registries (stem cell) and from 74 different laboratories around the world. We demonstrated that approximately 40% of the alleles officially named in the IMGT/HLA Database have been reported only once across all different sources. To facilitate the large-scale analysis of rare alleles, we have produced an online tool called the Rare Allele Detector that simplifies the detection of alleles that are considered to be 'very rare', 'rare' or 'frequent'. Tools and associated data can be accessed via the www.allelefrequencies.net website. |
| Databáze: | OpenAIRE |
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