The influence of mRNA primary and secondary structure on human IFN-{gamma} gene expression in E. coli

Autor: Tessier, Luc-Henri, Sondermeyer, Paul, Faure, Thérèse, Dreyer, Dominique, Benavente, Annie, Villeval, Dominique, Courtney, Michael, Lecocq, Jean-Pierre
Zdroj: Nucleic Acids Research; October 1984, Vol. 12 Issue: 20 p7663-7663, 1p
Abstrakt: Parameters influencing the efficiency of expression of the human ininune interferon (IFW-γ) gene in E.coli were studied by comparing a series of eight in vitro-derived gene variants. These contained all possible combinations of silent mutations in the first three codons of the mature IFN-γ polypeptide coding sequence. Expression levels varied up to 50-fold among the different constructions. Comparison of messenger RNA secondary structure models for each variant suggested that the presence of stem-loop structures blocking the translation initiation signals could drastically decrease the efficiency of IFN-γ synthesis. With variants displaying no stable n secondary structure in the region, a C+U transition at position +11 after the AUG resulted in a 5-fold increase in expression indicating that RNA primary structure also plays an important role in expression. In addition we demonstrate that, in this system, a spacing of 8 nucleotides between the Shine-Dalgarno region and AUG was optimal for gene expression and that the steady-state production level of IFN-γ rose exponentially with increasing rate of synthesis.
Databáze: Supplemental Index