Searching for Hif1-α interacting proteins in renal cell carcinoma.

Autor: Medina Villaamil, V., Aparicio Gallego, G., Santamarina Caínzos, I., Valladares-Ayerbes, M., Antón Aparicio, L.
Zdroj: Clinical & Translational Oncology; Sep2012, Vol. 14 Issue 9, p698-708, 11p
Abstrakt: Introduction: Kidney tumours are frequently characterised by hypoxic conditions due to a local imbalance between oxygen (O) supply and consumption. Hif1-α regulates angiogenesis, tumour growth, tumour progression, metastatic spread, and glucose metabolism by acting as a transcription factor for relevant genes. Here, we describe an immunohistochemical study of Hif1-α, a comprehensive computational study of Hif1-α interacting proteins (HIPs), an analysis correlating expression levels of Hif1-α with upstream and downstream proteins, and an analysis of the utility of Hif1-α for prognosis in a cohort of patients with renal cell carcinoma. Materials and methods: The patient cohort included 80 patients. For immunohistochemistry evaluation, tissue microarrays were constructed. The IntAct, MINT, and BOND databases were used for the HIP approach. The Kruskal-Wallis test was used for comparing protein expression with pathology measurements. Correlation was expressed as the Pearson coefficient. Results: Hif1-α expression correlates significantly with the 'clear' histological subtype of renal cell carcinoma ( p < 0.01). The samples with the worst prognoses related to the pathological variables analysed showed the highest levels of Hif1-α expression. Significant correlations were found with Bcl-2, CAIX, C-kit, EGFR, TGF-β, proteins of the VEGF family, proteins related to differentiation (such as Notch1 and Notch3) and certain metabolic enzymes. Bioinformatic analysis suggested 45 evidence-based HIPs and 4 complexes involving protein Hif1-α. Conclusions: This work summarises the multifaceted role of Hif1-α in the pathology of renal cell carcinomas, and it identifies HIPs that could help provide mechanistic explanations for the different behaviours seen in tumours. [ABSTRACT FROM AUTHOR]
Databáze: Complementary Index