A new technique for determining the distribution of N7-methylguanine using an automated DNA sequencer.

Autor: Shoukry, Safwat, Anderson, Marshall W., Glickman, Barry W.
Zdroj: Carcinogenesis; 1991, Vol. 12 Issue 11, p2089-2092, 4p
Abstrakt: We have developed a method to determine rapidly the sequence specificity of DNA alkylation resulting from chemical treatment. The utility of this approach is demonstrated here in a study of the sequence specificity of alkylation by dimethylsulphate (DMS). The method is independent of the sequence chosen and makes use of the polymerase chain reaction (PCR) to generate a fluorescently labelled DNA target. In this study, a 302 bp segment of the gene was amplified and the product purified by liquid chromatography on a Mono Q column. This DNA was alkylated with DMS and treated with hot piperidine to produce single-strand breaks at sites of 7 alkylation. The distribution of the break points, and hence the position and extent of alkylation, were determined on an Applied Biosystems 370A automated DNA sequencer. [ABSTRACT FROM PUBLISHER]
Databáze: Complementary Index