| Autor: |
Vega, Juan Manuel, Podio, Maricel, Orjuela, Julie, Siena, Lorena A., Pessino, Silvina C., Combes, Marie Christine, Mariac, Cedric, Albertini, Emidio, Pupilli, Fulvio, Ortiz, Juan Pablo A., Leblanc, Olivier |
| Předmět: |
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| Zdroj: |
Scientific Data; 8/16/2024, Vol. 11 Issue 1, p1-12, 12p |
| Abstrakt: |
Paspalum notatum Flüggé is an economically important subtropical fodder grass that is widely used in the Americas. Here, we report a new chromosome-scale genome assembly and annotation of a diploid biotype collected in the center of origin of the species. Using Oxford Nanopore long reads, we generated a 557.81 Mb genome assembly (N50 = 56.1 Mb) with high gene completeness (BUSCO = 98.73%). Genome annotation identified 320 Mb (57.86%) of repetitive elements and 45,074 gene models, of which 36,079 have a high level of confidence. Further characterisation included the identification of 59 miRNA precursors together with their putative targets. The present work provides a comprehensive genomic resource for P. notatum improvement and a reference frame for functional and evolutionary research within the genus. [ABSTRACT FROM AUTHOR] |
| Databáze: |
Complementary Index |
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