Establishing reliable DNA barcoding primers for jumping plant lice (Psylloidea, Hemiptera).

Autor: Bastin, Saskia, Percy, Diana M., Siverio, Felipe
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Zdroj: BMC Research Notes; 11/8/2023, Vol. 16 Issue 1, p1-7, 7p
Abstrakt: Objectives: DNA Barcoding has proven to be a reliable method for rapid insect identification. The success of this method is based on the amplification of a specific region, the 'Folmer' barcode region at the 5´ start of the cytochrome c oxidase 1 gene (cox1), with universal primers. Previous studies showed failures of standard "universal" primers to amplify this region in psyllids. The aim of the study was the design of a new alternative more reliable primer combination for taxa of the superfamily Psylloidea and its comparison with the performance of the standard "universal" Folmer-primers. Results: A newly designed degenerate forward primer LCOP-F was developed following comparison of the sequence alignment of the priming site of "universal" primer LCO1490 and the standard insect forward primer LepF1. When combined with the "universal" reverse primer, HCO2198, this new primer pairing was able to generate barcode sequence for all 36 species in 20 genera across the five families of psyllids tested in this study, and these primers were found to be more universally reliable across psyllid taxa than other primer pairs tested. [ABSTRACT FROM AUTHOR]
Databáze: Complementary Index
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