Identification of a novel domain -- DIM, which defines a new family composed mainly of bacterial membrane proteins.

Autor: Lai, Xuhui, Guo, Jinhu, Zhang, Xuelian, Wang, Honghai
Předmět:
Zdroj: FEMS Microbiology Letters; May2005, Vol. 246 Issue 1, p87-90, 4p
Abstrakt: Abstract: We report here the identification of a novel domain ¿ DIM (N-terminal domain in bacterial membrane proteins and other proteins) present exclusively in bacterial species including mycobacteria, revealed by PSI-BLAST iterative searches. DIM comprises about 53 amino acids in length with conserved Leu, Ile and Gly residues. Secondary structure prediction indicated that this domain contains two a-helices. DIM occurs at the N-terminus of proteins, and was found particularly but not exclusively in proteins with a transmembrane domain, and also in proteins with a FHA domain or RPT repeats. DIM-containing proteins have been reported to be involved in pathogenicity, signal transduction or small solute transport. [Copyright &y& Elsevier]
Databáze: Complementary Index