Distribution of HIV-1 in the genomes of AIDS patients.

Autor: Tsyba, L., Rynditch, A. V., Boeri, E., Jabbari, K., Bernardi, G.
Předmět:
Zdroj: Cellular & Molecular Life Sciences; Mar2004, Vol. 61 Issue 6, p721-726, 6p, 1 Chart, 2 Graphs
Abstrakt: The localization of HIV-1 proviruses in compositional DNA fractions from 27 AIDS patients during the chronic phase of the disease with depletion of CD4+ and different levels of viremia showed the following. (1) At low viremia, proviruses are predominantly localized in the GC-richest isochores, which are characterized by an open chromatin structure; this result mimics findings on HIV-1 integration in early infected cells in culture. (2) At higher viremia, an increased distribution of proviruses in GC-poor isochores (which match the GC poorness of HIV-1) was found; this suggests a selection of cells in which the ‘isopycnic’ localization leads to a higher expression of proviruses and, in turn, to higher viremia. (3) At the highest viremia, integrations in GC-rich isochores are often predominant again, but generally not at the same level as in (1); this may be the consequence of new integrations from the extremely abundant RNA copies. [ABSTRACT FROM AUTHOR]
Databáze: Complementary Index