| Autor: |
محسن سعدلو پاریزی, سدابه جهانبخش, حسین دشتی, روح اله صابری ریسه, حجت هاشمی نسب |
| Zdroj: |
Agricultural Biotechnology Journal; 2022, Vol. 14 Issue 4, p1-20, 20p |
| Abstrakt: |
Objective: Pistachio is one of the most important agricultural products and Iran has the richest germplasm of pistachio in the world. The presence of these genetic resources will be an appropriate opportunity for use in breeding purposes. Knowledge of genetic relationships among pistachio genotypes has an important role in its breeding programs. Molecular markers are one of the powerful tools for studying plant phylogenetic relationships. The Start Codon Targeted (SCoT) technique is one of the molecular systems is used to assess the genetic relationship among different plant species and cultivars. This study was performed to evaluate the genetic relationships between several Pistacia species and cultivars using SCoT molecular markers and to assess the usefulness of these markers in differentiating this genus. Materials and methods: Plant materials of this study included 29 genotypes of domestic and wild species of the genus Pistacia. A total of 25 SCoT primers were used to evaluate the genetic relationships. Genomic DNA was extracted from leaf samples using the CTAB method with minor modifications. The quantity and quality of the extracted DNA were measured by spectrophotometer and agarose gel electrophoresis. Cluster analysis based on Jaccard's similarity matrix and complete linkage algorithm and Principal coordinate analysis was performed using NTSYSpc 2.02e software. Results: In total, 449 DNA fragments were amplified by primers out of which 433 bands (96/43%) were polymorphic. The average number of amplified fragments for each primer was 17.96 bands with a mean of 17.32 polymorphic bands per primer. Some species-specific markers were detected in some genotypes. The average of polymorphism information content values varied from 0/18 to 0/38. Also, the values of marker indices ranged from 0/56 to 4/36. The range of similarity coefficients of genotypes varied between 25% to 68%. Cluster analysis divided genotypes into two main clusters including vera (domestic) and wild species. Principal coordinate analysis separated vera cultivars and genotypes from wild species and confirmed the results of cluster analysis. Conclusions: The results of this study demonstrated that SCoT molecular markers detected high polymorphism among pistachio species and cultivars and differentiated the studeid genotypes. Therefore, SCoT Marker is a useful tool for studying phylogenetic relationships in the genus Pistacia. [ABSTRACT FROM AUTHOR] |
| Databáze: |
Complementary Index |
| Externí odkaz: |
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