High-resolution molecular structure of a peptide in an amyloid fibril determined by magic angle spinning NMR spectroscopy.

Autor: Jaroniec, Christopher P., MacPheet, Cait E., Bajaj, Vikram S., McMahon, Michael T., Dobson, Christopher M., Griffin, Robert G.
Předmět:
Zdroj: Proceedings of the National Academy of Sciences of the United States of America; 1/20/2004, Vol. 101 Issue 3, p711-716, 6p
Abstrakt: Amyloid fibrils are self-assembled filamentous structures associated with protein deposition conditions including Alzheimer's disease and the transmissible spongiform encephalopathies. Despite the immense medical importance of amyloid fibrils, no atom-ic-resolution structures are available for these materials, because the intact fibrils are insoluble and do not form diffraction-quality 3D crystals. Here we report the high-resolution structure of a peptide fragment of the amyloidogenic protein transthyretin. TTR(105-115), in its fibrillar form, determined by magic angle spinning NMR spectroscopy. The structure resolves not only the backbone fold but also the precise conformation of the side chains. Nearly complete [sup13]C and [sup15]N resonance assignments for TTR(105-115) formed the basis for the extraction of a set of distance and dihedral angle restraints. A total of 76 self-consistent experimental measurements, including 41 restraints on 19 backbone dihedral angles and 35 [sup13]C-[sup15]N distances between 3 and 6 Å were obtained from 2D and 3D NMR spectra recorded on three fibril samples uniformly [sup13]C, [sup15]N-labeled in consecutive stretches of four amino acids and used to calculate an ensemble of peptide structures. Our results indicate that TTR(105-115) adopts an extended β-strand conformation in the amyloid fibrils such that both the main- and side-chain torsion angles are close to their optimal values. Moreover, the structure of this peptide in the fibrillar form has a degree of long-range order that is generally associated only with crystal- line materials. These findings provide an explanation of the unusual stability and characteristic properties of this form of polypeptide assembly. [ABSTRACT FROM AUTHOR]
Databáze: Complementary Index