Deciphering the Arf (ADP-ribosylation factor) gene family in Brassica napus L.: Genome-wide insights into duplication, expression, and rapeseed yield enhancement.

Autor: Wang H; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: swu0120@swu.edu.cn., Li X; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: lxd1997xy@email.swu.edu.cn., Meng B; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: beyul1340516624@email.swu.edu.cn., Chang W; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: cw2021@email.swu.edu.cn., Zhang M; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: zmh20181102@email.swu.edu.cn., Miao L; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: mlk970907@email.swu.edu.cn., Wei S; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: yyy9152@email.swu.edu.cn., Yang H; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: yhk1783826240@email.swu.edu.cn., Li S; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: drmalinna@email.swu.edu.cn., Fan Y; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: fanyonghai@email.swu.edu.cn., Qian M; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: qmc2020@email.swu.edu.cn., Chen Y; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China. Electronic address: wsl99917@email.swu.edu.cn., Khan SU; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China; Dubai Medical College for Girls (DMCG), United Arab Emirates. Electronic address: shahid@swu.edu.cn., Wei L; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China; Engineering Research Center of Grain and Oil Crops in Southwest Mountain, Ministry of Education, Chongqing 400715, PR China; Academy of Agricultural Sciences, Southwest University, Beibei, Chongqing 400715, PR China. Electronic address: lijuanwei@swu.edu.cn., Qu C; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China; Engineering Research Center of Grain and Oil Crops in Southwest Mountain, Ministry of Education, Chongqing 400715, PR China; Academy of Agricultural Sciences, Southwest University, Beibei, Chongqing 400715, PR China. Electronic address: drqucunmin@swu.edu.cn., Li J; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China; Engineering Research Center of Grain and Oil Crops in Southwest Mountain, Ministry of Education, Chongqing 400715, PR China; Academy of Agricultural Sciences, Southwest University, Beibei, Chongqing 400715, PR China. Electronic address: ljn1950@swu.edu.cn., Song J; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China; Engineering Research Center of Grain and Oil Crops in Southwest Mountain, Ministry of Education, Chongqing 400715, PR China; Academy of Agricultural Sciences, Southwest University, Beibei, Chongqing 400715, PR China. Electronic address: jmsong@swu.edu.cn., Lu K; Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, PR China; Engineering Research Center of Grain and Oil Crops in Southwest Mountain, Ministry of Education, Chongqing 400715, PR China; Academy of Agricultural Sciences, Southwest University, Beibei, Chongqing 400715, PR China. Electronic address: drlukun@swu.edu.cn.
Jazyk: angličtina
Zdroj: International journal of biological macromolecules [Int J Biol Macromol] 2024 Dec; Vol. 282 (Pt 5), pp. 137257. Date of Electronic Publication: 2024 Nov 04.
DOI: 10.1016/j.ijbiomac.2024.137257
Abstrakt: The Arf gene family is essential for crop growth and development by regulating vesicle transport. However, few studies exist on the role of Arfs in the growth and yield formation of Brassica napus. Here we provide an exhaustive account of the phylogeny and expression of the 66 Arfs in rapeseed. We found that the expansion of Arf gene family is mainly through whole genome duplication, and some genes are loss during the expansion process. Expression analysis revealed that the Arfs in group X, with the exception of BnaC02.ARFA1B, BnaC06.ARFA1A.2, and BnaA07.ARFA1A.2, exhibited high expression levels across various tissues of B. napus at different developmental stages. These results indicate that the Arfss in group X were important in influencing rapeseed growth and development. We have found that Arfs in B. napus may have a more complex regulatory mechanism due to homologous recombination and gene sub-functionalization. Haplotype analysis indicated that Arfs regulate B. napus yield formation. We found high expression of BnaC07.ARFA1A in all tissues, and its overexpression significantly increased rapeseed silique number and yield. The comprehensive analysis will further characterize the functions of Arfs in B. napus and enhance regulatory networks for yield formation in B. napus.
Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this article.
(Copyright © 2024 Elsevier B.V. All rights reserved.)
Databáze: MEDLINE
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