Disparate genetic divergence patterns in three corals across a pan-Pacific environmental gradient highlight species-specific adaptation.

Autor: Voolstra CR; Department of Biology, University of Konstanz, 78457, Konstanz, Germany. christian.voolstra@uni-konstanz.de., Hume BCC; Department of Biology, University of Konstanz, 78457, Konstanz, Germany., Armstrong EJ; PSL Research University, EPHE, CNRS, Université de Perpignan, Perpignan, France., Mitushasi G; Shimoda Marine Research Center, University of Tsukuba, 5-10-1, Shimoda, Shizuoka, Japan., Porro B; Université Côte d'Azur, CNRS, INSERM, Institute for Research on Cancer and Aging, Nice (IRCAN), Nice, France.; LIA ROPSE, Laboratoire International Associé Université Côte d'Azur-Centre Scientifique de Monaco, Monaco, Principality of Monaco.; French National Institute for Agriculture, Food, and Environment (INRAE), Université Côte d'Azur, ISA, France., Oury N; UMR 250/9220 ENTROPIE UR-IRD-CNRS-Ifremer-UNC, Laboratoire d'Excellence CORAIL, Université de la Réunion, St Denis de la Réunion, France., Agostini S; Shimoda Marine Research Center, University of Tsukuba, 5-10-1, Shimoda, Shizuoka, Japan., Boissin E; PSL Research University: EPHE-UPVD-CNRS, USR 3278 CRIOBE, Laboratoire d'Excellence CORAIL, Université de Perpignan, 52 Avenue Paul Alduy, 66860, Perpignan, France., Poulain J; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France.; Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 3 rue Michel-Ange, 75016, Paris, France., Carradec Q; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France.; Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 3 rue Michel-Ange, 75016, Paris, France., Paz-García DA; Centro de Investigaciones Biológicas del Noroeste (CIBNOR), Av. IPN 195, Col. Playa Palo de Santa Rita Sur, La Paz, 23096, Baja California Sur, México., Zoccola D; LIA ROPSE, Laboratoire International Associé Université Côte d'Azur-Centre Scientifique de Monaco, Monaco, Principality of Monaco.; Centre Scientifique de Monaco, 8 Quai Antoine Ier, MC-98000, Monaco, Principality of Monaco., Magalon H; UMR 250/9220 ENTROPIE UR-IRD-CNRS-Ifremer-UNC, Laboratoire d'Excellence CORAIL, Université de la Réunion, St Denis de la Réunion, France., Moulin C; Fondation Tara Océan, Base Tara, 8 rue de Prague, 75 012, Paris, France., Bourdin G; School of Marine Sciences, University of Maine, Orono, 04469, ME, USA., Iwankow G; PSL Research University: EPHE-UPVD-CNRS, USR 3278 CRIOBE, Laboratoire d'Excellence CORAIL, Université de Perpignan, 52 Avenue Paul Alduy, 66860, Perpignan, France., Romac S; Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 3 rue Michel-Ange, 75016, Paris, France.; Sorbonne Université, CNRS, Station Biologique de Roscoff, AD2M, UMR 7144, ECOMAP, Roscoff, France., Banaigs B; PSL Research University: EPHE-UPVD-CNRS, USR 3278 CRIOBE, Laboratoire d'Excellence CORAIL, Université de Perpignan, 52 Avenue Paul Alduy, 66860, Perpignan, France., Boss E; School of Marine Sciences, University of Maine, Orono, 04469, ME, USA., Bowler C; Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 3 rue Michel-Ange, 75016, Paris, France.; Institut de Biologie de l'Ecole Normale Supérieure, Ecole Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France., de Vargas C; Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 3 rue Michel-Ange, 75016, Paris, France.; Sorbonne Université, CNRS, Station Biologique de Roscoff, AD2M, UMR 7144, ECOMAP, Roscoff, France., Douville E; Laboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris-Saclay, Gif-sur-Yvette, France., Flores M; Weizmann Institute of Science, Department of Earth and Planetary Sciences, 76100, Rehovot, Israel., Furla P; Université Côte d'Azur, CNRS, INSERM, Institute for Research on Cancer and Aging, Nice (IRCAN), Nice, France.; LIA ROPSE, Laboratoire International Associé Université Côte d'Azur-Centre Scientifique de Monaco, Monaco, Principality of Monaco., Galand PE; Sorbonne Université, CNRS, Laboratoire d'Ecogéochimie des Environnements Benthiques (LECOB), Observatoire Océanologique de Banyuls, Banyuls-sur-Mer, France., Gilson E; Université Côte d'Azur, CNRS, INSERM, Institute for Research on Cancer and Aging, Nice (IRCAN), Nice, France.; LIA ROPSE, Laboratoire International Associé Université Côte d'Azur-Centre Scientifique de Monaco, Monaco, Principality of Monaco.; Department of Medical Genetics, CHU Nice, Nice, France., Lombard F; Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 3 rue Michel-Ange, 75016, Paris, France.; Laboratoire d'Océanographie de Villefranche, UMR 7093, Sorbonne Université, CNRS, 06230, Villefranche sur mer, France.; Institut Universitaire de France, 75231, Paris, France., Pesant S; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK., Reynaud S; LIA ROPSE, Laboratoire International Associé Université Côte d'Azur-Centre Scientifique de Monaco, Monaco, Principality of Monaco.; Centre Scientifique de Monaco, 8 Quai Antoine Ier, MC-98000, Monaco, Principality of Monaco., Sullivan MB; Department of Microbiology and Department of Civil, Environmental and Geodetic Engineering, The Ohio State University, Columbus, OH, USA., Sunagawa S; Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Zürich, Zurich, Switzerland., Thomas OP; School of Biological and Chemical Sciences, Ryan Institute, University of Galway, University Road, H91 TK33, Galway, Ireland., Troublé R; Fondation Tara Océan, Base Tara, 8 rue de Prague, 75 012, Paris, France., Thurber RV; Department of Microbiology, Oregon State University, Corvallis, OR, USA., Wincker P; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France.; Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 3 rue Michel-Ange, 75016, Paris, France., Planes S; PSL Research University: EPHE-UPVD-CNRS, USR 3278 CRIOBE, Laboratoire d'Excellence CORAIL, Université de Perpignan, 52 Avenue Paul Alduy, 66860, Perpignan, France., Allemand D; LIA ROPSE, Laboratoire International Associé Université Côte d'Azur-Centre Scientifique de Monaco, Monaco, Principality of Monaco.; Centre Scientifique de Monaco, 8 Quai Antoine Ier, MC-98000, Monaco, Principality of Monaco., Forcioli D; Université Côte d'Azur, CNRS, INSERM, Institute for Research on Cancer and Aging, Nice (IRCAN), Nice, France. didier.forcioli@univ-cotedazur.fr.; LIA ROPSE, Laboratoire International Associé Université Côte d'Azur-Centre Scientifique de Monaco, Monaco, Principality of Monaco. didier.forcioli@univ-cotedazur.fr.
Jazyk: angličtina
Zdroj: Npj biodiversity [NPJ Biodivers] 2023 Jul 07; Vol. 2 (1), pp. 15. Date of Electronic Publication: 2023 Jul 07.
DOI: 10.1038/s44185-023-00020-8
Abstrakt: Tropical coral reefs are among the most affected ecosystems by climate change and face increasing loss in the coming decades. Effective conservation strategies that maximize ecosystem resilience must be informed by the accurate characterization of extant genetic diversity and population structure together with an understanding of the adaptive potential of keystone species. Here we analyzed samples from the Tara Pacific Expedition (2016-2018) that completed an 18,000 km longitudinal transect of the Pacific Ocean sampling three widespread corals-Pocillopora meandrina, Porites lobata, and Millepora cf. platyphylla-across 33 sites from 11 islands. Using deep metagenomic sequencing of 269 colonies in conjunction with morphological analyses and climate variability data, we can show that despite a targeted sampling the transect encompasses multiple cryptic species. These species exhibit disparate biogeographic patterns and, most importantly, distinct evolutionary patterns in identical environmental regimes. Our findings demonstrate on a basin scale that evolutionary trajectories are species-specific and can only in part be predicted from the environment. This highlights that conservation strategies must integrate multi-species investigations to discern the distinct genomic footprints shaped by selection as well as the genetic potential for adaptive change.
(© 2023. The Author(s).)
Databáze: MEDLINE
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