A web application for gene-based queries of CaeNDR RNA-seq data.
| Autor: | Bell AD; School of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia, United States., Paaby AB; School of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia, United States. |
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| Jazyk: | angličtina |
| Zdroj: | MicroPublication biology [MicroPubl Biol] 2024 Jun 05; Vol. 2024. Date of Electronic Publication: 2024 Jun 05 (Print Publication: 2024). |
| DOI: | 10.17912/micropub.biology.001194 |
| Abstrakt: | Variation in gene expression is a feature of all living systems and has recently been characterized extensively among wild strains of the model organism Caenorhabditis elegans. To enable researchers to query gene expression and gene expression variation at any gene of interest, we have created a user-friendly web application that shares RNA-seq transcription data for 208 wild C. elegans strains generated by the Caenorhabditis Natural Diversity Resource (CaeNDR). Here, we describe the features of the web application and the details of the data and data processing underlying it. We hope that this website, wildworm.biosci.gatech.edu/cendrexp/ , will help C. elegans researchers better understand their favorite genes and strains. Competing Interests: The authors declare that there are no conflicts of interest present. (Copyright: © 2024 by the authors.) |
| Databáze: | MEDLINE |
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