A De Novo Whole Genome Assembly and Annotation of Parelaphostrongylus tenuis .

Autor: Garwood TJ; Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota-Twin Cities, Room 495 Animal Science/Veterinary Medicine Building, 1988 Fitch Avenue, St. Paul, MN, 55108., Richards JE; Department of Biomedical and Diagnostic Sciences, College of Veterinary Medicine, University of Tennessee-Knoxville, 2407 River Drive, Knoxville, TN, 37996., Macchietto MG; Minnesota Supercomputing Institute, University of Minnesota-Twin Cities, 117 Pleasant Street SE, 547 Walter Library, Minneapolis, MN, 55455., Gerhold RW; Department of Biomedical and Diagnostic Sciences, College of Veterinary Medicine, University of Tennessee-Knoxville, 2407 River Drive, Knoxville, TN, 37996., Kania SA; Department of Biomedical and Diagnostic Sciences, College of Veterinary Medicine, University of Tennessee-Knoxville, 2407 River Drive, Knoxville, TN, 37996., Garbe JR; Genomics Center, University of Minnesota-Twin Cities, 2231 6th Street SE, Minneapolis, MN, 55455., Fountain-Jones NM; School of Natural Sciences, University of Tasmania, Private Bag 37, Hobart, Tasmania, Australia 7001., Larsen PA; Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota-Twin Cities, Room 239B Veterinary Science Building, 1971 Commonwealth Avenue, Saint Paul, MN, 55108., Wolf TM; Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota-Twin Cities, Room 495 Animal Science/Veterinary Medicine Building, 1988 Fitch Avenue, St. Paul, MN, 55108.
Jazyk: angličtina
Zdroj: Journal of nematology [J Nematol] 2024 Mar 14; Vol. 56 (1), pp. 20240009. Date of Electronic Publication: 2024 Mar 14 (Print Publication: 2024).
DOI: 10.2478/jofnem-2024-0009
Abstrakt: Parelaphostrongylus tenuis causes ungulate morbidity and mortality in eastern and central North America, but no reference genome sequence exists to facilitate research. Here, we present a P. tenuis genome assembly and annotation, generated with PacBio and Illumina technologies. The assembly is 491 Mbp, with 7285 scaffolds and 185 kb N50.
(© 2024 Tyler J. Garwood et al., published by Sciendo.)
Databáze: MEDLINE
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