Flexible Bayesian semiparametric mixed-effects model for skewed longitudinal data.

Autor: Ferede MM; Department of Statistics, University of Gondar, Gondar, Ethiopia. melkamum2m@gmail.com., Dagne GA; Department of Epidemiology and Biostatistics, College of Public Health, University of South Florida, Tampa, FL 33612, USA., Mwalili SM; Department of Statistics and Actuarial Sciences, Jomo Kenyatta University of Agriculture and Technology (JKUAT), Nairobi, Kenya., Bilchut WH; Department of Internal Medicine, College of Medicine and Health Sciences, University of Gondar, Gondar, Ethiopia., Engida HA; Department of Mathematics, Debre Markos University, Debre Markos, Ethiopia., Karanja SM; School of Public Health, Jomo Kenyatta University of Agriculture and Technology (JKUAT), Nairobi, Kenya.
Jazyk: angličtina
Zdroj: BMC medical research methodology [BMC Med Res Methodol] 2024 Mar 01; Vol. 24 (1), pp. 56. Date of Electronic Publication: 2024 Mar 01.
DOI: 10.1186/s12874-024-02164-y
Abstrakt: Background: In clinical trials and epidemiological research, mixed-effects models are commonly used to examine population-level and subject-specific trajectories of biomarkers over time. Despite their increasing popularity and application, the specification of these models necessitates a great deal of care when analysing longitudinal data with non-linear patterns and asymmetry. Parametric (linear) mixed-effect models may not capture these complexities flexibly and adequately. Additionally, assuming a Gaussian distribution for random effects and/or model errors may be overly restrictive, as it lacks robustness against deviations from symmetry.
Methods: This paper presents a semiparametric mixed-effects model with flexible distributions for complex longitudinal data in the Bayesian paradigm. The non-linear time effect on the longitudinal response was modelled using a spline approach. The multivariate skew-t distribution, which is a more flexible distribution, is utilized to relax the normality assumptions associated with both random-effects and model errors.
Results: To assess the effectiveness of the proposed methods in various model settings, simulation studies were conducted. We then applied these models on chronic kidney disease (CKD) data and assessed the relationship between covariates and estimated glomerular filtration rate (eGFR). First, we compared the proposed semiparametric partially linear mixed-effect (SPPLM) model with the fully parametric one (FPLM), and the results indicated that the SPPLM model outperformed the FPLM model. We then further compared four different SPPLM models, each assuming different distributions for the random effects and model errors. The model with a skew-t distribution exhibited a superior fit to the CKD data compared to the Gaussian model. The findings from the application revealed that hypertension, diabetes, and follow-up time had a substantial association with kidney function, specifically leading to a decrease in GFR estimates.
Conclusions: The application and simulation studies have demonstrated that our work has made a significant contribution towards a more robust and adaptable methodology for modeling intricate longitudinal data. We achieved this by proposing a semiparametric Bayesian modeling approach with a spline smoothing function and a skew-t distribution.
(© 2024. The Author(s).)
Databáze: MEDLINE
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