Evaluating Large Language Models in Extracting Cognitive Exam Dates and Scores.

Autor:	Zhang H; NYU Grossman School of Medicine., Jethani N; NYU Grossman School of Medicine., Jones S; NYU Grossman School of Medicine., Genes N; NYU Grossman School of Medicine., Major VJ; NYU Grossman School of Medicine., Jaffe IS; NYU Grossman School of Medicine., Cardillo AB; NYU Grossman School of Medicine., Heilenbach N; NYU Grossman School of Medicine., Ali NF; NYU Grossman School of Medicine., Bonanni LJ; NYU Grossman School of Medicine., Clayburn AJ; NYU Grossman School of Medicine., Khera Z; NYU Grossman School of Medicine., Sadler EC; NYU Grossman School of Medicine., Prasad J; NYU Grossman School of Medicine., Schlacter J; NYU Grossman School of Medicine., Liu K; NYU Grossman School of Medicine., Silva B; NYU Grossman School of Medicine., Montgomery S; NYU Grossman School of Medicine., Kim EJ; NYU Grossman School of Medicine., Lester J; NYU Grossman School of Medicine., Hill TM; NYU Grossman School of Medicine., Avoricani A; NYU Grossman School of Medicine., Chervonski E; NYU Grossman School of Medicine., Davydov J; NYU Grossman School of Medicine., Small W; NYU Grossman School of Medicine., Chakravartty E; NYU Grossman School of Medicine., Grover H; NYU Grossman School of Medicine., Dodson JA; NYU Grossman School of Medicine., Brody AA; NYU Rory Meyers College of Nursing, NYU Grossman School of Medicine., Aphinyanaphongs Y; NYU Grossman School of Medicine., Masurkar A; NYU Grossman School of Medicine., Razavian N; NYU Grossman School of Medicine.
Jazyk:	angličtina
Zdroj:	MedRxiv : the preprint server for health sciences [medRxiv] 2024 Feb 13. Date of Electronic Publication: 2024 Feb 13.
DOI:	10.1101/2023.07.10.23292373
Abstrakt:	Importance: Large language models (LLMs) are crucial for medical tasks. Ensuring their reliability is vital to avoid false results. Our study assesses two state-of-the-art LLMs (ChatGPT and LlaMA-2) for extracting clinical information, focusing on cognitive tests like MMSE and CDR. Objective: Evaluate ChatGPT and LlaMA-2 performance in extracting MMSE and CDR scores, including their associated dates. Methods: Our data consisted of 135,307 clinical notes (Jan 12th, 2010 to May 24th, 2023) mentioning MMSE, CDR, or MoCA. After applying inclusion criteria 34,465 notes remained, of which 765 underwent ChatGPT (GPT-4) and LlaMA-2, and 22 experts reviewed the responses. ChatGPT successfully extracted MMSE and CDR instances with dates from 742 notes. We used 20 notes for fine-tuning and training the reviewers. The remaining 722 were assigned to reviewers, with 309 each assigned to two reviewers simultaneously. Inter-rater-agreement (Fleiss' Kappa), precision, recall, true/false negative rates, and accuracy were calculated. Our study follows TRIPOD reporting guidelines for model validation. Results: For MMSE information extraction, ChatGPT (vs. LlaMA-2) achieved accuracy of 83% (vs. 66.4%), sensitivity of 89.7% (vs. 69.9%), true-negative rates of 96% (vs 60.0%), and precision of 82.7% (vs 62.2%). For CDR the results were lower overall, with accuracy of 87.1% (vs. 74.5%), sensitivity of 84.3% (vs. 39.7%), true-negative rates of 99.8% (98.4%), and precision of 48.3% (vs. 16.1%). We qualitatively evaluated the MMSE errors of ChatGPT and LlaMA-2 on double-reviewed notes. LlaMA-2 errors included 27 cases of total hallucination, 19 cases of reporting other scores instead of MMSE, 25 missed scores, and 23 cases of reporting only the wrong date. In comparison, ChatGPT's errors included only 3 cases of total hallucination, 17 cases of wrong test reported instead of MMSE, and 19 cases of reporting a wrong date. Conclusions: In this diagnostic/prognostic study of ChatGPT and LlaMA-2 for extracting cognitive exam dates and scores from clinical notes, ChatGPT exhibited high accuracy, with better performance compared to LlaMA-2. The use of LLMs could benefit dementia research and clinical care, by identifying eligible patients for treatments initialization or clinical trial enrollments. Rigorous evaluation of LLMs is crucial to understanding their capabilities and limitations.
Databáze:	MEDLINE
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