The complete chloroplast genome of Spergularia marina (Caryophyllaceae) and its phylogenetic analysis.
| Autor: | Erdenebaatar K; Division of Science Education and Institute of Fusion Science, Jeonbuk National University, Jeonju, Republic of Korea., Park JM; Forest Resource Research Division, Jeollabuk-do Forest Environment Research Institute, Jinan, Republic of Korea., Koo J; Division of Science Education and Institute of Fusion Science, Jeonbuk National University, Jeonju, Republic of Korea. |
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| Jazyk: | angličtina |
| Zdroj: | Mitochondrial DNA. Part B, Resources [Mitochondrial DNA B Resour] 2023 Dec 07; Vol. 8 (12), pp. 1343-1346. Date of Electronic Publication: 2023 Dec 07 (Print Publication: 2023). |
| DOI: | 10.1080/23802359.2023.2288891 |
| Abstrakt: | Spergularia marina (L.) Griseb, 1843 (Caryophyllaceae) is a halophytic plant widely distributed along the southwestern coast of the Korean Peninsula. In this study, the complete chloroplast genome sequence of S. marina was determined using next-generation sequencing (NGS). The chloroplast genome of S. marina is 152,460 bp in length with 36.7% GC content. It comprises a large single-copy (LSC; 83,321), a small single copy (SSC; 17,205 bp), and a pair of inverted repeats (IRs; 25,967 bp) with a typical quadripartite structure. It consists of 131 genes, including 86 protein-coding genes, 8 ribosomal RNAs, and 37 transfer RNAs. Phylogenetic analysis using complete chloroplast genomes showed that among the 17 Caryophyllaceae species, S. marina is most closely related to Spergula arvensis . Since no complete chloroplast genome of the genus Spergularia has been reported to date, our study provides useful genetic information for determining phylogenetic relationships within the Caryophyllaceae. Competing Interests: No potential conflict of interest was reported by the author(s). (© 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.) |
| Databáze: | MEDLINE |
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