DeepPyramid+: medical image segmentation using Pyramid View Fusion and Deformable Pyramid Reception.

Autor: Ghamsarian N; ARTORG Center for Biomedical Engineering Research, University of Bern, Bern, Switzerland. negin.ghamsarian@unibe.ch., Wolf S; Department of Ophthalmology, Inselspital, Bern, Switzerland., Zinkernagel M; Department of Ophthalmology, Inselspital, Bern, Switzerland., Schoeffmann K; Department of Information Technology, University of Klagenfurt, Klagenfurt, Austria., Sznitman R; ARTORG Center for Biomedical Engineering Research, University of Bern, Bern, Switzerland.
Jazyk: angličtina
Zdroj: International journal of computer assisted radiology and surgery [Int J Comput Assist Radiol Surg] 2024 May; Vol. 19 (5), pp. 851-859. Date of Electronic Publication: 2024 Jan 08.
DOI: 10.1007/s11548-023-03046-2
Abstrakt: Purpose: Semantic segmentation plays a pivotal role in many applications related to medical image and video analysis. However, designing a neural network architecture for medical image and surgical video segmentation is challenging due to the diverse features of relevant classes, including heterogeneity, deformability, transparency, blunt boundaries, and various distortions. We propose a network architecture, DeepPyramid+, which addresses diverse challenges encountered in medical image and surgical video segmentation.
Methods: The proposed DeepPyramid+ incorporates two major modules, namely "Pyramid View Fusion" (PVF) and "Deformable Pyramid Reception" (DPR), to address the outlined challenges. PVF replicates a deduction process within the neural network, aligning with the human visual system, thereby enhancing the representation of relative information at each pixel position. Complementarily, DPR introduces shape- and scale-adaptive feature extraction techniques using dilated deformable convolutions, enhancing accuracy and robustness in handling heterogeneous classes and deformable shapes.
Results: Extensive experiments conducted on diverse datasets, including endometriosis videos, MRI images, OCT scans, and cataract and laparoscopy videos, demonstrate the effectiveness of DeepPyramid+ in handling various challenges such as shape and scale variation, reflection, and blur degradation. DeepPyramid+ demonstrates significant improvements in segmentation performance, achieving up to a 3.65% increase in Dice coefficient for intra-domain segmentation and up to a 17% increase in Dice coefficient for cross-domain segmentation.
Conclusions: DeepPyramid+ consistently outperforms state-of-the-art networks across diverse modalities considering different backbone networks, showcasing its versatility. Accordingly, DeepPyramid+ emerges as a robust and effective solution, successfully overcoming the intricate challenges associated with relevant content segmentation in medical images and surgical videos. Its consistent performance and adaptability indicate its potential to enhance precision in computerized medical image and surgical video analysis applications.
(© 2024. The Author(s).)
Databáze: MEDLINE
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