The structure of the tetraploid sour cherry 'Schattenmorelle' ( Prunus cerasus L.) genome reveals insights into its segmental allopolyploid nature.
| Autor: | Wöhner TW; Institute for Breeding Research on Fruit Crops, Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Dresden, Saxony, Germany., Emeriewen OF; Institute for Breeding Research on Fruit Crops, Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Dresden, Saxony, Germany., Wittenberg AHJ; KeyGene N.V., Wageningen, Netherlands., Nijbroek K; KeyGene N.V., Wageningen, Netherlands., Wang RP; KeyGene N.V., Wageningen, Netherlands., Blom EJ; KeyGene N.V., Wageningen, Netherlands., Schneiders H; KeyGene N.V., Wageningen, Netherlands., Keilwagen J; Institute for Biosafety in Plant Biotechnology, Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Quedlinburg, Saxony-Anhalt, Germany., Berner T; Institute for Biosafety in Plant Biotechnology, Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Quedlinburg, Saxony-Anhalt, Germany., Hoff KJ; Institute of Mathematics and Computer Science, University of Greifswald, Greifswald, Mecklenburg-Western Pomerania, Germany., Gabriel L; Institute of Mathematics and Computer Science, University of Greifswald, Greifswald, Mecklenburg-Western Pomerania, Germany., Thierfeldt H; Institute of Mathematics and Computer Science, University of Greifswald, Greifswald, Mecklenburg-Western Pomerania, Germany., Almolla O; Dipartimento di Scienze Agrarie, Forestali e Alimentari (DISAFA) - Plant Genetics, University of Turin, Grugliasco, Italy., Barchi L; Dipartimento di Scienze Agrarie, Forestali e Alimentari (DISAFA) - Plant Genetics, University of Turin, Grugliasco, Italy., Schuster M; Institute for Breeding Research on Fruit Crops, Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Dresden, Saxony, Germany., Lempe J; Institute for Breeding Research on Fruit Crops, Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Dresden, Saxony, Germany., Peil A; Institute for Breeding Research on Fruit Crops, Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Dresden, Saxony, Germany., Flachowsky H; Institute for Breeding Research on Fruit Crops, Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Dresden, Saxony, Germany. |
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| Jazyk: | angličtina |
| Zdroj: | Frontiers in plant science [Front Plant Sci] 2023 Dec 01; Vol. 14, pp. 1284478. Date of Electronic Publication: 2023 Dec 01 (Print Publication: 2023). |
| DOI: | 10.3389/fpls.2023.1284478 |
| Abstrakt: | Sour cherry ( Prunus cerasus L.) is an important allotetraploid cherry species that evolved in the Caspian Sea and Black Sea regions from a hybridization of the tetraploid ground cherry ( Prunus fruticosa Pall.) and an unreduced pollen of the diploid sweet cherry ( P. avium L.) ancestor. Details of when and where the evolution of this species occurred are unclear, as well as the effect of hybridization on the genome structure. To gain insight, the genome of the sour cherry cultivar 'Schattenmorelle' was sequenced using Illumina NovaSeqTM and Oxford Nanopore long-read technologies, resulting in a ~629-Mbp pseudomolecule reference genome. The genome could be separated into two subgenomes, with subgenome Pce Competing Interests: Authors AW, KN, RW, E-JB and HS were employed by company KeyGene N.V. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. (Copyright © 2023 Wöhner, Emeriewen, Wittenberg, Nijbroek, Wang, Blom, Schneiders, Keilwagen, Berner, Hoff, Gabriel, Thierfeldt, Almolla, Barchi, Schuster, Lempe, Peil and Flachowsky.) |
| Databáze: | MEDLINE |
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